Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq5267 190 2e-43
seq5114 122 1e-22
seq5238 109 6e-19
>seq5267
Length=4296760
Score = 190 bits (210), Expect = 2e-43
Identities = 540/824 (66%), Gaps = 8/824 (1%)
Strand=Plus/Plus
Query 92806 TGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGAATTC 92865
||||| || || || || || || ||||| || ||||| || |||| || ||| | |
Sbjct 668458 TGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCC 668517
Query 92866 ACTAG--TGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAATAAT 92923
| | ||| || ||||||| || || ||| || || || ||| || |
Sbjct 668518 ATGAAGTTGAAGGGGTTCTTGGTATTGTAGATCTTGCCAACGCCCAGCTCCACCAGCAGA 668577
Query 92924 CTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGT 92983
| ||| || || ||||| |||||||| ||||| | || |||||||| || | || |
Sbjct 668578 CGATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATGCCGATGAGGTTT 668637
Query 92984 ACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT 93043
|| || | || ||||| | ||| || | ||| || | || || || | ||| ||
Sbjct 668638 ACGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCGCGGATGATCTCG 668697
Query 93044 ATTA--CTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACG-CAAAG 93100
|| | | || ||| || || || | | | | |||| | ||||| |||||
Sbjct 668698 ATGATGCGCTCGCGCCTGG--GTCGCTGCACCAAGTGCTGGAACATCA-GCACGGCAAAG 668754
Query 93101 TCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAAC 93160
||| || | || ||||| || || || | ||| ||| ||| || | || || | |
Sbjct 668755 TCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGTCCCGGCATC 668814
Query 93161 AGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCC 93220
|| || || ||||| ||||| || || || || || || || || || || || ||
Sbjct 668815 AGACCGCGCTTCTTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAAGAAGATGCCCTCG 668874
Query 93221 ACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTT 93280
||||| ||||| || | || || || | || || || | || | ||||||
Sbjct 668875 ACGGCGGCAAAGGCAATGATGCGCTCCCCGAAGTTGGCCGCCTTGGAGGAGATCCAGGAA 668934
Query 93281 AAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAA 93340
| ||||| || || || ||| | | || | ||| ||||| ||||| || |||||
Sbjct 668935 AGGGCCCAGTCCGCCTTGCGCTTCACAGCGGGCATTGTCTCGATGGCGTTGAACAGGTAT 668994
Query 93341 TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGG 93400
|| |||| || || ||| || ||||| || ||||| | || | ||||| || || ||
Sbjct 668995 TCGCGCTGGTGCGGATCCCGGATGTAGGTGTCGATCAGCACACTGTACATCTCCGAGTGC 669054
Query 93401 ACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCT 93460
|| |||||||| || || ||||| || ||||| || | ||| |||||||||||||| ||
Sbjct 669055 ACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCGAGCCTCCGTGATCTGCACCTCC 669114
Query 93461 TGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCC 93520
|| || | ||| || || || || || || || |||||||| || || || || |||
Sbjct 669115 TGGCTGAAGCGCTCGACCAGGTTCTCGTTAACGATGCCATCGGAGGCGGCGAAGAAGGCC 669174
Query 93521 AATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCT 93580
| | ||| || || || ||| || || || || | ||| |||| || ||
Sbjct 669175 AGCACGTGCGAGATGAAGTGGCGCTCGTCGTCCTTCAGGCGGTGCCAGTCGGTCAGGTCC 669234
Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
|| || ||||| || || || || ||||| || || || || ||
Sbjct 669235 TTGGAGAGATCCACCTCCTCCACGGTCCAGAAAGAGGCCTCAGC 669278
>seq5114
Length=3386121
Score = 122 bits (134), Expect = 1e-22
Identities = 81/89 (91%), Gaps = 2/89 (2%)
Strand=Plus/Plus
Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320
|||||||||||||||||| |||||||||||||||||||||| |||||||| | | ||
Sbjct 444963 ACAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAGAGAGA 445022
Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||||||||||
Sbjct 445023 GCGTGGGTTCGAACCCCACACCTGACAAA 445051
Score = 109 bits (120), Expect = 6e-19
Identities = 77/87 (89%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAG 126321
||| ||||||||||||| |||||||||||||||||||||| |||||||| | | |||
Sbjct 287130 CAGCCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGTGAGAGAG 287189
Query 126322 CGTGGGTTCGAACCCCACACCTGACAA 126348
||||||||||||||||||||||| |||
Sbjct 287190 CGTGGGTTCGAACCCCACACCTGGCAA 287216
>seq5238
Length=3592495
Score = 109 bits (120), Expect = 6e-19
Identities = 77/87 (89%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGA 126320
|||| ||||||||||||| |||||||||||||||||||||| |||||||| | | ||
Sbjct 1460255 ACAGCCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCTCGAGAGAGA 1460314
Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||||||||||||||||| ||
Sbjct 1460315 GCGTGGGTTCGAACCCCACACCTGGCA 1460341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556822355722520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |