Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 248 7e-61
seq5402 116 3e-21
seq5395 113 4e-20
seq5238 105 6e-18
>seq5396
Length=9561034
Score = 248 bits (274), Expect = 7e-61
Identities = 1039/1627 (64%), Gaps = 26/1627 (2%)
Strand=Plus/Plus
Query 128778 CTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCC 128837
||| |||||||| || | ||| |||| || || ||||| ||||||| |||||||| ||
Sbjct 8233758 CTTATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATTCC 8233817
Query 128838 TGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGG 128897
||||| | ||| |||||| | | | ||| || | || | | | ||| | ||
Sbjct 8233818 AGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTGG 8233877
Query 128898 TTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957
| || | ||| || || || ||||| ||||| || || | || ||||| || ||
Sbjct 8233878 CTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGGC 8233937
Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017
||| ||| |||||| ||||||||||| |||||||| || || | || |
Sbjct 8233938 CATCTTAATGGTCGACTTCACTGAGATTTCCCACACTGTTTTGTACAGATCGCGGACCTT 8233997
Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077
| || || | ||||| ||||| | ||| || | | ||| |||| ||| |||
Sbjct 8233998 CTGGGGGATGGCCTCAATATTCTGGATTGAGCCCCTGCTGGAAATGATTTGGTTCTTCAT 8234057
Query 129078 CTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTG 129137
| |||| |||| | ||| | | | || ||| | | ||| | |||||
Sbjct 8234058 GTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCACTTG 8234117
Query 129138 AAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTC 129197
|| || || | || ||| |||| ||||| || | ||| ||||||| || |||||
Sbjct 8234118 GAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAAAGATTC 8234177
Query 129198 ATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAGTT 129257
|||||||| | ||||| || || | ||| |||||||| || || | || |||||
Sbjct 8234178 GTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAGGGAGTT 8234237
Query 129258 TCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGTGGG 129317
|| | ||||||||| || ||| | || | || ||||||||| | ||| ||
Sbjct 8234238 CCGGACACCGTGCTGCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTTGTCGG 8234297
Query 129318 TGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGTAGGA 129377
| | ||||| |||||| |||| || || || ||||||| ||||
Sbjct 8234298 CACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCTCACGGGACTTCCCTCATAGGT 8234357
Query 129378 ATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAATAAAT 129437
|| | ||||| | |||| ||| ||||| ||||||| ||||| | || ||
Sbjct 8234358 TTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCGTAGTAGAT 8234417
Query 129438 TGTTTCGGCAAT-TTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGTACGGCATACGC 129495
|||||| ||| | || || ||||| | ||| | || ||||| || || | ||||
Sbjct 8234418 GGTTTCG--AATATCTGCTGATTCAAGAGACCGGCTTCTTCACTTTCATAGGGGAAACGC 8234475
Query 129496 AACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTCTA 129555
| | | | ||| || || || || | ||| | || | ||| ||||| |
Sbjct 8234476 ATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTCAAG 8234535
Query 129556 TTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAATTC 129615
|||||||| | |||| || ||| ||| |||| || || || || ||||| | ||||
Sbjct 8234536 TTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTGTTAAGATTC 8234595
Query 129616 TTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTACATCGATG 129675
||| || | || || || | || | | | |||| ||| | || | |||
Sbjct 8234596 TTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTA--TGTCTTC-TCGGGA 8234652
Query 129676 TCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCA 129735
||| || |||| || || ||||| |||||||| ||| | ||||
Sbjct 8234653 GTGACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAG 8234712
Query 129736 CTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGA 129795
|||||| || ||||| | |||||| || || || |||||||| | || || ||
Sbjct 8234713 GAGTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGG 8234772
Query 129796 TTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGC 129855
|| || ||| ||||||| ||||| || ||| |||||| || | || |||||||| ||
Sbjct 8234773 TTGCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTGT 8234832
Query 129856 GTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTC--TT---ACAAATTTGC 129910
| || | ||||| ||||| | ||||||| | | || || || | |
Sbjct 8234833 GCCTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTTGGCACGA-----C 8234887
Query 129911 CACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTACGGTGTCGA-GC 129969
| || ||| || | |||||| | ||| ||||| ||| || || | ||
Sbjct 8234888 CCTCTTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGGC 8234947
Query 129970 AACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATA 130029
| ||| ||| | |||||||||| | ||| ||||| || ||||| || ||||||
Sbjct 8234948 CAGGGC-ATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATA 8235006
Query 130030 AACAAATCGGGTACCCACAGGGCGTACAACAAATCTC--GCGCTTTTCTATCCTCGGCAC 130087
|| | |||||||| |||||||||||| |||| ||| | |||| ||| ||||| |
Sbjct 8235007 AAGAGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTC--TCCTCCTTGC 8235064
Query 130088 CCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAA 130147
| |||| || ||||| ||||| || | | ||| | |||||| || || | ||||
Sbjct 8235065 CGGTGTTCTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAA 8235124
Query 130148 TTGCCATTGCGCCCTTCCGTTTGCCCCCT---TGGTCAACGTGGCGCACGGCATTGTTGT 130204
| || | || || || ||||| ||| || || || | |||| | ||||||||
Sbjct 8235125 TGGCAAAGGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGA 8235184
Query 130205 AGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGC 130264
|||| | |||||| | ||| || |||| |||||||| |||| ||| | |||
Sbjct 8235185 AGACCCTCAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGC 8235244
Query 130265 CACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACG 130324
| || || | | ||| ||| | || || ||||||||| | | || || |||| |
Sbjct 8235245 CCTTTGCTCGGATGCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATCATGG 8235304
Query 130325 CGCAATCGCGTAGCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGA 130384
|||| | | | | | ||||||| |||| ||| || | ||| | | |||||
Sbjct 8235305 CGCACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGAGGA 8235364
Query 130385 AACACGA 130391
|||| ||
Sbjct 8235365 AACAAGA 8235371
>seq5402
Length=10656099
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||||| ||||| || || |||| || || ||||| | |
Sbjct 571637 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCATCT 571578
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || || || ||||||||||| ||||| || |||||
Sbjct 571577 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCAG 571518
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | ||||| ||||| | || |||||||||
Sbjct 571517 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACTCTTTCTGATTACAAC 571458
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || || ||| | ||||| ||| | || |||| || ||
Sbjct 571457 ATCCAGAAGGAGTCGACCTTGCATTTGGTTCTCCGTCTGCGAGGTGG 571411
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || ||||| || || || || ||||| || | || | || ||||| ||
Sbjct 571868 AAAATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAGCCC 571809
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| || | || || | || || || || ||||||||||| || || || |||
Sbjct 571808 TCCGACACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGAT 571749
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || |||||||| || | ||||| || ||| | ||||| |||
Sbjct 571748 CAGCAGCGTCTGATCTTCGCCGGCAAGCAACTGGAGGACGGACGTACCCTGTCCGACTAC 571689
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || ||| | || || || | || ||||||| |||
Sbjct 571688 AACATCCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTGCGCGGTGGT 571638
>seq5395
Length=2659632
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| || || || | || || || || |||| ||||| || || ||
Sbjct 975988 AACATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 975929
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | || || | || || || || ||||||||||| || || || ||
Sbjct 975928 TCCGACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGAC 975869
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || ||||| || ||| | ||||| |||||| | |||||||||
Sbjct 975868 CAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGATTAC 975809
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| || || || |||||| | || || ||
Sbjct 975808 AACATCCAGAAGGAGTCCACCCTCCACTTGGT 975777
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| ||||| || || || ||
Sbjct 975757 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCTCC 975698
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | | || || || || ||||||||||| || || || || ||
Sbjct 975697 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 975638
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || ||||| || ||| | ||||| |||||| | ||||| ||||||
Sbjct 975637 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAAC 975578
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||||| | || || || | || |||| || ||
Sbjct 975577 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 975531
>seq5238
Length=3592495
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || ||||| | ||||| || || |||| | || ||||| | |
Sbjct 2679234 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCG 2679293
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || || || || ||||||||||| || || || |||||
Sbjct 2679294 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAG 2679353
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || || |||||||| ||| | ||||| ||||||| | ||||| ||||||
Sbjct 2679354 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCCGACTACAAC 2679413
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || || |||
Sbjct 2679414 ATCCAGAAGGAGTCGACC 2679431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419699747452495
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