Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 161 2e-34
seq5395 161 2e-34
seq5238 161 2e-34
seq1972 161 2e-34
seq5402 152 9e-32
seq5267 100 5e-16
>seq5396
Length=9561034
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| |||||||| | |||||||| || || |||||||| || |||
Sbjct 8331077 CCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAG 8331018
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || ||||| || || | || || || || |||
Sbjct 8331017 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 8330958
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||| ||||| |||||||| || ||||| ||||| || || | | ||| ||
Sbjct 8330957 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACC 8330898
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || |||||||||||||| ||||| ||||||||
Sbjct 8330897 TCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 8330851
>seq5395
Length=2659632
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||||||| || |||||||| || |||||||| ||||||||
Sbjct 975759 CCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 975818
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || ||||| || ||
Sbjct 975819 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 975878
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||||| || |||||||||||| | | || ||
Sbjct 975879 ATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGGAGGGCTCGACC 975938
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || || |||||||| ||||| || |||||
Sbjct 975939 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCAT 975985
>seq5238
Length=3592495
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||| | |||| ||| || || ||||| || |||||||| || |||||
Sbjct 2679460 CCACCGCGTAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2679401
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | || || || || ||
Sbjct 2679400 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 2679341
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| ||||| || |||||||||||| | | || ||
Sbjct 2679340 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACC 2679281
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||||||||||| || || |||||||| || ||||| || |||||
Sbjct 2679280 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2679234
Score = 116 bits (128), Expect = 7e-21
Identities = 105/132 (80%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 268363 GCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAG 268422
||| |||||||| | |||||| || ||||||||||| | ||||||||||||||||| ||
Sbjct 398686 GCGGGTGATTTTCCTGGTCACAAAGTTCTCGCCACGTCGTGGGCTCTCGTGGTTGAACAG 398745
Query 268423 GATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGC 268482
|||||| ||||| ||| ||||| || ||||| |||||||| | ||| ||||| | |
Sbjct 398746 GATGCCATTGCAAGCGTACATGTTGTAGGCCTCGCGGTAGTTGATGACGATCCAGAAGCC 398805
Query 268483 AAACATCTTTGC 268494
||||||| ||
Sbjct 398806 GTACATCTTGGC 398817
Score = 86.0 bits (94), Expect = 1e-11
Identities = 189/281 (67%), Gaps = 2/281 (1%)
Strand=Plus/Plus
Query 268514 GGATGGAAGGGCGTCGTGATCTTT-TGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGA 268572
|||| |||||| ||| || || || || || | || ||||| ||| | ||||| ||
Sbjct 398896 GGATAGAAGGGTGTC-TGTTCGTTCTGTGGCGTCTCCACCACTTTCCCATACAGCTCCGA 398954
Query 268573 GGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAG 268632
|| || |||||||||||||| || ||||| | || || | || || || || ||
Sbjct 398955 AGTGGAGGCTTGGTAGAACTTCACCGTCTTTTCCATGCCACAAGTGCGAATGGCGTCCAG 399014
Query 268633 CAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACAC 268692
| || | || |||| | ||||||| || || || || || | ||||| || ||
Sbjct 399015 GATGCGCAACGTACCCACGGCATCCACCTCGGCCGTGTATTCGCTAAGGTCGAAGGAGAC 399074
Query 268693 CTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGCACGAT 268752
|| ||||||| || || |||| || || | ||| || |||||| | | |||
Sbjct 399075 CTTGACATGGGATTGCGCCGCCAGATTGTAGATCTCCGTGGGCTTGACCATATTGATGAT 399134
Query 268753 CTTCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCA 268793
|||||| ||| | | ||| || | ||| ||||||||||
Sbjct 399135 CTTCACCAGGCTGCTGCTGTCCGTCATGTCGCCGTAGTGCA 399175
>seq1972
Length=1348
Score = 161 bits (178), Expect = 2e-34
Identities = 190/257 (74%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 186004 GGTGTTCGATGTCACGATGGCGCCAATCATGGTCTGTGGAATGCCCTCGAAGTTTGCGAG 186063
|||||| || |||||||||||||| |||| | |||| || | | || | |||| || ||
Sbjct 893 GGTGTTGGACGTCACGATGGCGCCGATCAGGTTCTGCGGCACGGCCGAGTAGTTGGCCAG 834
Query 186064 CAGCTGCTTCGTGTCCTTGGGGAAGCAGTAGCCGCCGTAGCCGAAGCTCGGGTTGCAATA 186123
||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||| ||
Sbjct 833 CAGCTGCTTGGTGTCCTTGGGCAGGCAGTAGCCACCGTAGCCGAAGCTCGGGTTGTTGTA 774
Query 186124 GCCTCCGCCAATACGTGGCTCGTGCGTGATGCCCTCGATGATGTCCTTTGCATTCAGACC 186183
| ||||| || || || | | ||| |||||||| || | ||||| ||
Sbjct 773 GTGCGTGCCAACGCGCGGGTCCAGGCACACGCCGTCGATGATCTCGCGGGTGTTCAGGCC 714
Query 186184 ATTCACCATTGCAAACGAGTCGAGCTCATTGAAAAACGACACGCGCATCGCGAGGTACGT 186243
| | | ||| | | ||||||||| ||||| | | |||||||||||| ||||| ||
Sbjct 713 GTGCGTCTGGGCATAGGTGTCGAGCTCGTTGAAGTAGGCCACGCGCATCGCAAGGTAGGT 654
Query 186244 ATTCGCAAACAACTTGA 186260
|| || |||| |||||
Sbjct 653 GTTGGCGAACAGCTTGA 637
>seq5402
Length=10656099
Score = 152 bits (168), Expect = 9e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || || || || | ||||| || | || ||||| || |||||||| ||||| |
Sbjct 571409 TTCCACCTCGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGGATGTTGTAATCAG 571468
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | || || || | |||||| |||||||| || || | || || || || |
Sbjct 571469 AAAGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGG 571528
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
|||| || |||||||| || ||||| ||||| ||| |||||||||||| | || || |
Sbjct 571529 GAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCAGATGGCTCCA 571588
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| |||| ||||||||| || || || | |||||||| || ||||||||
Sbjct 571589 CCTCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 571637
>seq5267
Length=4296760
Score = 100 bits (110), Expect = 5e-16
Identities = 522/823 (63%), Gaps = 40/823 (5%)
Strand=Plus/Plus
Query 9971 CTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030
|||||||||||||| |||||| || || || || | ||||||||||| ||||||||||
Sbjct 668478 CTCGAAGAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCATGAAGTTGAAGGGGTTCTT 668537
Query 10031 GGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGAT 10090
|| | |||| || || | | | || || |||||||| |||||
Sbjct 668538 GGTATTGTAGATCTTGCCAACGCCCAGCTCCACCAGCAGACGATCCGCCACGAATTCGAT 668597
Query 10091 GTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAAT 10150
|||||| ||| ||||| | |||||||| || | | ||| | ||| ||| |
Sbjct 668598 GTACTGCGACATGAGGTCGCAATTCATGCCGATGAGGTTTACGGGCAAGGCATCGGTGAG 668657
Query 10151 GAAGTCCTTTTCGTTGGCGACCGCTTC---------CTCGACGATGCTCTTTACCACGTC 10201
||| |||| || |||| || || || ||||| ||||| || | || |
Sbjct 668658 GAACTCCTGCTCTATGGCCACAGCATCGCGGATGATCTCGATGATGCGCT----CGCGCC 668713
Query 10202 AAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCC 10261
||| | ||| | | ||| ||| || ||| | |||| | ||| |||||
Sbjct 668714 T-GGGTC-GCTGCACCAAGTGCTG-GAA--CATCAGCACGGCAAAGTCGCAGTGCAGGCC 668768
Query 10262 CTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCG 10321
|||||||||| ||||| ||||||||| || ||| || ||||| || || || ||
Sbjct 668769 CTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGTCCCGGCATCAGACCGCGCTTCTT 668828
Query 10322 CAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCCTCCACGCACACCCAG 10379
|||||||||||||| | ||| ||| ||| ||||| ||||| ||| | ||
Sbjct 668829 CAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAA--GAAGATGCCCTCGACGGCGGCAAAG 668886
Query 10380 GCGACGAGGCGCTCTGCGAAGGAGCGGTCGCGCGAAAAGTATTTCGAGG------CCCAC 10433
|| | || |||||| ||||| | | ||| | || | || ||| ||||
Sbjct 668887 GCAATGATGCGCTCCCCGAAGTTG--GCCGC-CTTGGAGGAGATCCAGGAAAGGGCCCAG 668943
Query 10434 GCTGCCTT---CTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAAGAGCTTGTTACGC 10490
| ||||| ||| ||| || || || |||||||| || | ||| || | | |||
Sbjct 668944 TCCGCCTTGCGCTT---CACAGCGGGCATTGTCTCGATGGCGTTGAACAGGTATTCGCGC 669000
Query 10491 TCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCTCGCTGTGGACGCTC 10550
| | | ||| || | || | |||| ||| ||| ||| ||| ||
Sbjct 669001 TGGTGCGGATCCCGGATGTAGGTGTCGATCAGCACACTGTACATCTCCGAGTGCACGTTC 669060
Query 10551 TCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCGTGACTTCCTCGGCA 10610
|| || |||| | | ||||| || ||| | | | || |||| |
Sbjct 669061 TCCATGGCGATCTGGAAGCCATAGAAGCAGCGAGCCTCCGTGATCTGCACCTCCTGGCTG 669120
Query 10611 AAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATG 10670
||| | | ||||||||| | || ||||||||| | | || |||||| | || | |
Sbjct 669121 AAGCGCTCGACCAGGTTCTCGTTAACGATGCCATCGGAGGCGGCGAAGAAGGCCAGCACG 669180
Query 10671 TGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGG 10730
||| ||||||||||||||| || || ||||| | ||||||| || |||| |
Sbjct 669181 TGCGAGATGAAGTGGCGCTCGTCGTCCTTCAGGCGGT---GCCAGTCGGTCAGGTCCTTG 669237
Query 10731 TTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCT 10773
||| | |||||||||||||||||||||| ||| | ||||
Sbjct 669238 GAGAGATCCACCTCCTCCACGGTCCAGAAAGAGGCCTCAGCCT 669280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921558773493560
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