Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 89.7 1e-14
>seq4739
Length=5756469
Score = 89.7 bits (98), Expect = 1e-14
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393
|||||| || |||||||| | |||| ||||| || ||||| |||||||| ||
Sbjct 1691623 CCCATGGCCCGGGTCTTTCCGAAGGTCACCAAGTGTACGTTCCACAAGTACGGTCCCTCC 1691564
Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453
||| || | || | ||| || || ||| | || || |||| | ||||||||||||
Sbjct 1691563 GGCAGTGTGCAGAAGTTCGACGGTCTGTGCGTGCTGCCCCTGAACATTGTCAACGAGAAG 1691504
Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480
|||||| | ||||| ||||||||||||
Sbjct 1691503 ATCTACGTGTTCCTGTGGTTCTGGTTC 1691477
Score = 86.0 bits (94), Expect = 2e-13
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426
|| || || ||||| |||||| | || ||||| ||| | || |||| |||||||||
Sbjct 1719531 TGCACCTTCCACAAGTACGGTGCCTCCGGCTCGCTGCAGAAGCACGACTCCCTCTGCATC 1719590
Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCT 3481
|| ||| |||| | || |||||||||| ||| | ||| |||||||||||||||
Sbjct 1719591 CTGCCGCTGAACATTGTGAACGAGAAGACGTACGTGTTCATCTGGTTCTGGTTCT 1719645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12479246110500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |