Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 96.9 3e-15
seq5395 87.8 2e-12
seq5402 86.0 5e-12
>seq5396
Length=9561034
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | || || || || | || || || || |||||||| || ||
Sbjct 8331078 ACCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGA 8331019
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || || |||||| || || || |||||| |||| |||||||| || || |||||
Sbjct 8331018 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 8330959
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||||||||| |||||| ||| | | ||| | || || | | ||||||
Sbjct 8330958 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGAC 8330899
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || ||||| || || || || || || ||||||||
Sbjct 8330898 CTCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 8330851
>seq5395
Length=2659632
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | | || || || | || || || || || ||||||||||||
Sbjct 975756 ATGCCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCG 975815
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || || || || || || || ||| |||| |||||||| ||||| ||
Sbjct 975816 GACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGG 975875
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| ||||| || | | || | |||||||| || |||
Sbjct 975876 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGGAGGGCTCG 975935
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | || ||||| ||||| || || || ||||| ||||||
Sbjct 975936 ACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCATG 975986
>seq5402
Length=10656099
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232
||| ||||| | || || || || || ||||||||||| | ||| || || ||
Sbjct 571428 AACCAAATGCAAGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCCTC 571487
Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292
|| || || || ||| |||| |||||||| || || || ||||| || || |||||
Sbjct 571488 GAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTG 571547
Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352
||||| || | | || | |||||| | | || || |||| ||| | || ||
Sbjct 571548 GATCTTGGCCTTCACGTTCTCGATGGTGTCAGATGGCTCCACCTCCAGGGTGATGGTCTT 571607
Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||||||| ||| || ||||| ||||||||
Sbjct 571608 GCCGGTCAAAGTCTTGACAAAGATCTGCAT 571637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420106120097076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |