Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq5165 147 2e-30 >seq5165 Length=2344106 Score = 147 bits (162), Expect = 2e-30 Identities = 426/649 (66%), Gaps = 30/649 (5%) Strand=Plus/Plus Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTG-TA 20193 || ||||| || || |||||| ||||||| || ||| ||||| | || ||| | || Sbjct 2002004 GGGAAGGGCCGCGGCGTGCGCTCCAGCTGCTCCCTTAGCGGCTCCACGTG-GTTCAGATA 2002062 Query 20194 GATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGC 20253 || ||| | || |||| ||||| | ||| || ||||| | || || || ||||| || Sbjct 2002063 GACGTGCGTGTCGCCCATGGTGTGCACAAAGTCGCCGGGCTTCAGGCCCGTCACATGGGC 2002122 Query 20254 AAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTC 20313 | ||| | || | |||| ||| ||| ||||| || || || |||| |||||||| Sbjct 2002123 GATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAGGCCCATGTC 2002182 Query 20314 TCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT------ACATAAAATTG 20367 | ||| || |||||||| ||||| ||||||||| || ||||| || || Sbjct 2002183 GGCGCTCCTTTGGTACAGCTGGCAGGAGAGCTCACCGCGCGCCTGCGAGACATAGAACTG 2002242 Query 20368 ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACA 20427 | |||| || |||||||| |||||| | | ||| || ||||| || | Sbjct 2002243 GGCCAGGCAGTGGCACGGCGGAAGGGCCATCTTTGGTATGTCGAGGGGATTCCAGGCCGA 2002302 Query 20428 CATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTG 20487 ||| ||||| | || || ||||| || || || || | | | ||| || Sbjct 2002303 CATGATGATGCGCCTGTCCGAGGGATTCTTCTTGATCGTGTCGATCACCTGGCGCAACTG 2002362 Query 20488 GTCAAACCCCTGGCCTGTATAGTCAGCATC-CGCGTCCACGTACGCCGCCCCAAAGTGCC 20546 ||| | |||| ||| | || || | || | || | ||||| | ||||||||||| | Sbjct 2002363 GTCGATGCCCTTGCCGCTGTAATCGTCGTCGCAGGTGC-CGTACTCGGCCCCAAAGTGAC 2002421 Query 20547 TCCACTGGAAACCGTAAACAGGTCCCAAATCCCC-----CTCCCTTC-TGTGCGCCAGGC 20600 ||||||||| |||||||| || |||| || || | | || | ||||| ||| Sbjct 2002422 GCCACTGGAAGCCGTAAACCGGGCCCAGGTCGCCGACGGCGCGCTCCGTGTGCCCCA--- 2002478 Query 20601 CGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTG 20660 | | ||||||||||||||| || || | |||||| || | || ||||||| Sbjct 2002479 ---GTTTGTCCAGGAACTCCCTGGTGCTGTTCTCGTCCCAGATGTGCAC----GTTCTTG 2002531 Query 20661 ----AAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACG 20716 ||| | ||| ||| || | || || ||||| | |||||| | | ||| Sbjct 2002532 GCCTGCAGCAGCTTGGCGTCCGTCTTGCCGGCCACGAACCAGATCAGCTCCTCGGCCACG 2002591 Query 20717 CCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAGTGGTCCCGCA 20765 || || | || || ||||| ||||| || | ||||||| ||| |||| Sbjct 2002592 CCGCGGAAGAAGACGCGCTTGGTGGTCAGCAGGGGAAAGGAGTCGCGCA 2002640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441342328725320