Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 140 8e-28
seq5395 140 8e-28
seq5402 125 2e-23
seq5238 105 2e-17
seq5267 93.3 1e-13
>seq5396
Length=9561034
Score = 140 bits (154), Expect = 8e-28
Identities = 148/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || |||||||| | ||| ||||| || ||||| | || || || ||||||
Sbjct 8331041 TCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 8330982
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| ||| ||||| ||||||||||| ||||| || || ||||| ||
Sbjct 8330981 ATCAGACGCTGCTGA---TCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 8330925
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| |||| ||| | ||| || || |||||||| ||||| || || || |||||
Sbjct 8330924 TTTTCGATAGTATCCGAAGGTTCGACCTCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTA 8330865
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 8330864 ACGAAGATCTGCAT 8330851
>seq5395
Length=2659632
Score = 140 bits (154), Expect = 8e-28
Identities = 148/194 (76%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| || ||||||||||| || | || ||||| ||||||
Sbjct 975567 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAG 975626
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || ||| |||||||| || || |||||||| || || ||||||
Sbjct 975627 ATCAGACGCTGCTG---GTCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACG 975683
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | |||| | || || || || ||||| ||||| || ||||| |||||
Sbjct 975684 TTCTCGATGGTATCGGAGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 975743
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 975744 ACGAAGATCTGCAT 975757
Score = 120 bits (132), Expect = 7e-22
Identities = 169/235 (72%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | || || | || | ||| || || ||||| || || |
Sbjct 975755 CATG-CCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAAT 975813
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||||||||| || | || ||||| ||||||||||||||||| || |
Sbjct 975814 CGGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTG---GT 975870
Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
|| |||||||| || || |||||||| || || || || || || || | ||| |
Sbjct 975871 CTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGGAGG 975930
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| || ||||| ||||| ||||| || |||||
Sbjct 975931 GCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCAT 975985
>seq5402
Length=10656099
Score = 125 bits (138), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || || || | || ||||||||||| || | || || || ||||||
Sbjct 571447 TCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAG 571506
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || ||||||| ||||| || || |||||||| || || ||||||
Sbjct 571507 ATCAGACGCTGCTG---ATCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACG 571563
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || | || || || || ||||| ||||| ||||||| |||||||
Sbjct 571564 TTCTCGATGGTGTCAGATGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTG 571623
Query 288460 ACGAATATCTGCAT 288473
|| || ||||||||
Sbjct 571624 ACAAAGATCTGCAT 571637
Score = 116 bits (128), Expect = 9e-21
Identities = 173/243 (71%), Gaps = 8/243 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || || | |||| || || || ||||| || |||||||
Sbjct 571639 CCACCGCGCAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 571698
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
|| || |||||||| || | ||| || || ||||||||||||||||| || ||||
Sbjct 571699 AGGGTACGTCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 571755
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || || |||||||| || || ||||| || || || | ||| | ||
Sbjct 571756 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAGGGCTCC 571815
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG--TTAT 288481
|| || | || || ||||| || |||| ||||| || || ||||||||| || ||||
Sbjct 571816 ACCTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATTTTGGATTAT 571875
Query 288482 TCT 288484
|||
Sbjct 571876 TCT 571878
>seq5238
Length=3592495
Score = 105 bits (116), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||||||| || | || || || || | || || || ||||| || |||||||
Sbjct 2679460 CCACCGCGTAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2679401
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363
|| ||||| ||||| || | || || || ||||||||||||||||| || ||||
Sbjct 2679400 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 2679344
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || || |||||||| || || ||||| || || || | || | ||
Sbjct 2679343 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCC 2679284
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||| ||||| ||||| || || || ||||| || |||||
Sbjct 2679283 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2679234
>seq5267
Length=4296760
Score = 93.3 bits (102), Expect = 1e-13
Identities = 114/156 (73%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211
||||| |||||| ||| |||||| || || |||||||||||||| |||||| | |
Sbjct 668630 ATCGGCATGAATTGCGACCTCATGTCGCAGTACATCGAATTCGTGGCGGATCGTCTGCTG 668571
Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271
|| || || || || | |||||| | ||||| |||||| ||| ||||| |
Sbjct 668570 GTGGAGCTGGGCGTTGGCAAGATCTACAATACCAAGAACCCCTTCAACTTCATGGAGATG 668511
Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAG 269307
|| ||||| || || ||||| ||||||||||| |||
Sbjct 668510 ATCTCGCTGGACGGCAAGACCAACTTCTTCGAGAAG 668475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179570923599594
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |