Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq5267 84.2 5e-11 >seq5267 Length=4296760 Score = 84.2 bits (92), Expect = 5e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || |||||||| | || |||||| ||||||||||||||||| || || || | Sbjct 668633 CTCATCGGCATGAATTGCGACCTCATGTCGCAGTACATCGAATTCGTGGCGGATCGTCTG 668574 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | | ||| || || || | ||||| ||||||||||||| ||| |||||| Sbjct 668573 CTGGTGGAGCTGGGCGTTGGCAAGATCTACAATACCAAGAACCCCTTCAACTTCATGGAG 668514 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAG 243720 | || ||||| | || || || ||||||||||| ||| Sbjct 668513 ATGATCTCGCTGGACGGCAAGACCAACTTCTTCGAGAAG 668475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102801956420050