Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq5267 158 1e-33
seq4488 104 3e-17
>seq5267
Length=4296760
Score = 158 bits (174), Expect = 1e-33
Identities = 268/383 (70%), Gaps = 4/383 (1%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
||| || || ||| ||||||||||||||| ||||| ||||||| ||| |||||||
Sbjct 668460 GTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCAT 668519
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 125876
|| | || |||||||| | || | || ||| || | || | || || ||||
Sbjct 668520 GAAGTTGAAGGGGTTCTTGGTATTGTAGATC-TTGCCAACGCCCAGCTCCACCAGCAGAC 668578
Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936
|||||| ||| | || ||||||| ||||| || | ||||| |||||||||||
Sbjct 668579 GATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATGCCGATGAGGTTTA 668638
Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996
|| | || || || |||| ||| ||| || |||| || || || | ||| ||
Sbjct 668639 CGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCGCGGATGATCTCGA 668698
Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCT 126055
||| || || |||| | || | |||| || ||| | ||||||||| ||
Sbjct 668699 TGATGCGCTCGCGCCTGGGTCGCT-GCACCAAGTGCTGGAACATCAGCACGGCAAAGTCG 668757
Query 126056 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGA 126115
||| || |||||||| ||||||||||| || || |||||| |||||| ||||| |||
Sbjct 668758 CAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGTCCCGGCATCAGA 668817
Query 126116 CCCCGCTTCTTCAACCAGAAAAT 126138
|| |||||||||| |||||||||
Sbjct 668818 CCGCGCTTCTTCAGCCAGAAAAT 668840
>seq4488
Length=490991
Score = 104 bits (114), Expect = 3e-17
Identities = 169/241 (70%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 171907 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATT 171966
||| || || ||| | | || || || || ||||| | || || || ||||| |||||
Sbjct 138696 ATCCTTTCCGCCCGTCAAGCGAGTACCGAACTGACCGCGTGGCTCCAGCAGATTAATATT 138637
Query 171967 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 172025
||||| |||| ||| | ||||| || || || || ||| || || || || ||||
Sbjct 138636 GTTTGCGCCCACAAAGTTCTGGGCCAGATTAACGATTGTCATCTGC-AGCGAAACCTCAC 138578
Query 172026 CGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATCTCAT 172085
|||| |||||||||||| | || || || | | | | ||| |||||||||| ||||
Sbjct 138577 CGTGGTGGTAGGCCGACATCTCGGCCACGGAACCAGATAGCTGGGCCACCTTCACCTCAC 138518
Query 172086 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 172145
|||| ||| | | |||||| | |||| ||||| | ||| ||||| |||||||
Sbjct 138517 GCTTGTCGTTTCTCTTGAAGCAGGTGAACATCACCTTGCGCTGACCTGGCTTCAGGCCGT 138458
Query 172146 C 172146
|
Sbjct 138457 C 138457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597312360200840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |