Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq5091 100 2e-16
seq2115 100 2e-16
seq5132 91.5 1e-13
>seq5091
Length=3955622
Score = 100 bits (110), Expect = 2e-16
Identities = 130/177 (73%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 108448 CAGAACACCATCCCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG 108507
||||||||| | | ||||||| || ||| | || |||||||| || ||||| ||
Sbjct 1368082 CAGAACACCCTGTACGACTGGGTGCGGGACCACCGAGTCCACCACAAATATTCTGAGACC 1368141
Query 108508 ACGGCCGACCCACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATG 108567
|| || || |||||||||||| |||| |||| ||||| |||||||| ||||| |||
Sbjct 1368142 GATGCAGATCCCCACAACGCCAACCGGGGATTCTTTTTCTCCCACGTGGGCTGGCTGATG 1368201
Query 108568 ATGACCAAGGACCCCGACGTGATCTCGGC-CGGTCGAAAAATGGACATGACGGACAT 108623
||| ||| |||| || ||| | || | |||||| | || ||||||| |||||
Sbjct 1368202 ATGCTGAAGCACCCGGAGGTGCT-GCGTCGCGGTCGCCAGATCGACATGAGCGACAT 1368257
Score = 89.7 bits (98), Expect = 4e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940
|||| | ||||||||||||||||||||||||||||| ||||||| ||||||||||| |
Sbjct 1368897 TGGCCATGGGCGAGGGATGGCACAACTACCACCACGTCTTCCCCTGGGACTACAAGGCAG 1368956
Query 108941 CCGAGTTGGGGAACGAC 108957
| ||| |||| ||| ||
Sbjct 1368957 CGGAGCTGGGCAACTAC 1368973
Score = 84.2 bits (92), Expect = 2e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 108465 GTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAA 108524
||||| || ||||||||| | |||||||||| ||| || || ||||| || |||||
Sbjct 1356885 GTGGGCCCTGGATCACAGGATACACCACAAGTTCTCGGAGACCGATGCCGATCCGCACAA 1356944
Query 108525 CGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACC 108573
|||||| |||| |||| ||| | |||||||| |||||| | |||||
Sbjct 1356945 CGCCAAGCGGGGCTTCTTCTTCGCCCACGTGGGCTGGCTCTTCCTGACC 1356993
>seq2115
Length=2123598
Score = 100 bits (110), Expect = 2e-16
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 108355 ACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCCACCGCCCCGTTCAGG 108414
|||||||| || ||||| ||||| | ||||| ||||||||||||| ||| | |
Sbjct 840753 ACGGCCGGTGTGCATCGCCTGTGGTCGCACAAGGCCTACAAGGCCAAGCTGCCGCTGCGC 840694
Query 108415 GTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCCGCAGTGGGTGCTC 108474
| ||||| ||| ||| ||| |||| ||||||| |||| | ||||| | |
Sbjct 840693 ATCTTCCTCATGCTGTGCCAGTCGCTGGCCTTCCAGAACAGCATCTGGGAGTGGACCCGC 840634
Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534
|| ||| | || |||||||||| | | ||||| ||||| || |||||| | | |
Sbjct 840633 GACCACCGTGTGCACCACAAGTTCACCGACACACACGCCGATCCCCACAACTCGCGCCGC 840574
Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGTGA 108589
|| |||| ||| | ||| |||| ||||| ||| | ||| ||||||| ||||
Sbjct 840573 GGCTTCTTCTTCGCCCACATGGGCTGGCTGATGTGCAAGAAGCACCCCGATGTGA 840519
Score = 95.1 bits (104), Expect = 9e-15
Identities = 125/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 108781 CTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCACATGTACGGCGACCGTCCGTTCGAC 108840
||| |||| || |||||||| || ||||| ||| | |||||| || | |||
Sbjct 840017 CTCCACTTCACCTGGCTGGTGAACAGCGCGGCCCACTTCTACGGCATGAAGCCCTACGAT 839958
Query 108841 AAGAACATTT-TCCCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTCTCGGCGAGGGATG 108899
|||| | | ||| || | ||||| ||||| | | || | |||||||||||||
Sbjct 839957 GTGAACGTGAGTGCCATGA-ACAACAAGCTGGTGTCCACCCTGACCATCGGCGAGGGATG 839899
Query 108900 GCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTGGG 108950
|||||||||||||||||| ||||||| ||||||||||| || ||| ||||
Sbjct 839898 GCACAACTACCACCACGTCTTCCCCTGGGACTACAAGGCAGCTGAGCTGGG 839848
>seq5132
Length=3397788
Score = 91.5 bits (100), Expect = 1e-13
Identities = 104/139 (75%), Gaps = 3/139 (2%)
Strand=Plus/Minus
Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940
|||| |||||||||||||||| |||||||||||||| ||||||| ||||||||| | |
Sbjct 27493 TGGCCTTCGGCGAGGGATGGCATAACTACCACCACGTCTTCCCCTGGGACTACAAGACGG 27434
Query 108941 CCGAGTTGGGGAACGACT---TTAATTTCACCGCTAGGATATTGGACTTTGCCGCGTCGA 108997
||||||| || || ||| | || |||||| | | | | ||||| ||| ||
Sbjct 27433 CCGAGTTCGGCAAATACTCGCTAAACTTCACCACCGGCTTCATCGACTTCTTCGCCAAGA 27374
Query 108998 GAGGATGGGTCTACGACCT 109016
|| |||| |||||||||
Sbjct 27373 TCGGCTGGGCCTACGACCT 27355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381747102276312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |