Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 205 8e-48
>seq5396
Length=9561034
Score = 205 bits (226), Expect = 8e-48
Identities = 929/1458 (64%), Gaps = 40/1458 (3%)
Strand=Plus/Minus
Query 123235 CCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGG---CGGCAAACGCA 123291
||||| || | || | ||| || | | ||| | ||||| ||||| |||||| ||
Sbjct 8235199 CCATGTTGAGGGTCTTCAACAATGTGGCGCGCTATGTCGATCAGGGAGGCGGCAAGCGTC 8235140
Query 123292 AAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTA-AAT 123350
|| || | || || || || || || |||||| || || | || || | ||
Sbjct 8235139 CCGGTGCCTTTGCCATTTACCTGGAGCCCTGGCACTCGGACGTCTTTGAGTTCCTGGAAC 8235080
Query 123351 TTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGG 123410
|||| | | |||| || ||| || || ||||||||| |||| ||||| | |||
Sbjct 8235079 TTAAGAAG-AACACCGGCAAGGAGGAGAATCGCGCCCGCGATCTGTTCTACGCCCTGTGG 8235021
Query 123411 GTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCC 123470
|||||||| | |||||| ||||| | | | | || | ||||| || ||||||||
Sbjct 8235020 ATACCCGATCTCTTTATGAAGCGCGTCGAGGCCAATGGAGATTGGTCACTAATGTGTCCG 8234961
Query 123471 GATCGGTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAA 123530
|| || || ||| | ||| || | ||| || | || || ||||||| | | |
Sbjct 8234960 CATAAATGCCCTGGCCTTCACGATGTGTGGGGCGATGAATTCGAAAAGTTGTATGAGAAG 8234901
Query 123531 TACGAGCGCGAAGG------CAAACA---GGTTAGTCAGGTTCCGGCACGTGATTTGTTC 123581
|| |||| || || ||| | ||||| ||| || | | || | ||||
Sbjct 8234900 TATGAGCAAGAGGGTCGTGCCAACCGAACGGTTA---AGGCTCAATC-CTTG--TGGTTC 8234847
Query 123582 AAATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCC 123641
||||| || |||| |||||||| |||| || |||||||| | || || |||
Sbjct 8234846 GCCATTATT---GAGGCACAGGTCGAAACTGGAAACCCCTACATGCTGTTTAAGGATGCC 8234790
Query 123642 TGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCC 123701
||||||||||| | ||| ||| || | || || || || || || || | ||| |
Sbjct 8234789 TGCAACAGGAAGAGCAACCAGCAGAATGTCGGCACCATCAAGTGCAGCAACTTGTGCACA 8234730
Query 123702 GAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGC 123761
||||| | || ||| | | | || | | || || || || ||||| || || |
Sbjct 8234729 GAAATCGTGGAGTACTCCTCTCCGGACGAGATTGCAGTCTGCAACTTGGCATCCATCGCC 8234670
Query 123762 GTGAATCGTTGCGTCGAAAACGGCG----CTTTTAATTTCCAAACGCTCAAACGCATAAC 123817
| || | |||| | | | | | | ||||| | | || || | ||
Sbjct 8234669 CTCAACATGTTCGTC-ACTCCCGAGAAGACATACGATTTCAAGAAACTTAAGGAAGTTAC 8234611
Query 123818 AAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGA 123877
|| || || |||||| | ||||| || |||||| | || || || || || ||
Sbjct 8234610 CAAGACGGTTACCAAGAATCTTAACAAGATCATCGATATAAACTTCTACCCCCTGCCAGA 8234551
Query 123878 AGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGA 123937
|| || || |||| || | || || || | || | || || || || ||
Sbjct 8234550 GGCAAAGAAATCCAACTTGAGGCATCGTCCCGTGGGCATCGGTGTCCAGGGATTCGCTGA 8234491
Query 123938 CGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTT-AATACGC 123996
||| | | | |||| | || || ||||| || ||||| || ||| ||| ||
Sbjct 8234490 CGCCCTAATTCTTATGCGTTTCCCCTATGAAAGTGAAGAAGCCG-GTCTCTTGAATCAGC 8234432
Query 123997 AAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTC 124056
| ||| |||||| || || |||||||| |||| || || || ||||| || | ||
Sbjct 8234431 AGATATTCGAAACCATCTACTACGGCGCCCTGGAAGCCAGTTGTGAACTGGCCCAGATCG 8234372
Query 124057 ACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACA 124116
||||| | || |||| || | ||| || || | |||| ||| ||| ||||||||||||
Sbjct 8234371 ACGGCCCATATGAAACCTATGAGGGAAGTCCCGTGAGCAAAGGCATTCTGCAGTACGACA 8234312
Query 124117 TGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGA 124176
||||| | |||||||| | ||||||||| | || | ||| |
Sbjct 8234311 TGTGGGACAAAGTGCCGACAAACCTTTGGGACTGGCAGAAACTGAAGGAGTCCATCAAGC 8234252
Query 124177 CGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAA 124236
||||||| | || ||||| |||||||| ||| ||||| || || ||||||| ||||
Sbjct 8234251 AGCACGGTGTCCGGAACTCCCTGTTGGTTGCGCCTATGCCCACTGCGTCCACTGCCCAAA 8234192
Query 124237 TTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGT 124296
|| | || ||||||||||| |||||||||| ||| | ||| | || | |||||
Sbjct 8234191 TTATGGGCAACAACGAATCTTTCGAGCCGTACACAACGAATATTTATACCAGGCGAGTTC 8234132
Query 124297 TAGCCGGCGATTTTCAAGTGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATT 124356
| | ||||| || |||||| | || ||||||||| | ||| | || | | | |
Sbjct 8234131 TGTCTGGCGAATTCCAAGTGGTTAACCATCATTTGTTAAGGGACCTAACGGAGCTGGACT 8234072
Query 124357 TGTACGATGAAAACATGCGCAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCG 124416
||| || || ||||| ||| |||| ||| | | | ||| | ||| || |
Sbjct 8234071 TGTGGGACGACGACATGAAGAACCAAATCATTTCCAGCAGGGGCTCAATCCAGAATATTG 8234012
Query 124417 CTTCGATTCCGGAACACGTCAAGCAACTGTACAAAACCGTGTGGGAAAT----GAAAAAT 124472
| || || | | ||| | ||||||||||| ||||||||||| | || |
Sbjct 8234011 AGGCCATCCCCCAGAAGGTCCGCGATCTGTACAAAACAGTGTGGGAAATCTCAGTGAAGT 8233952
Query 124473 AAACGATTAATTGAAATGGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTT 124532
|| |||| | ||||||| || ||||| |||| || ||||| ||||| || ||
Sbjct 8233951 CGACCATTA----AGATGGCCGCAGATCGAGGAGCGTTCATAGATCAGAGTCAGTCGTTC 8233896
Query 124533 AACGTGTTTGTAGCGGAACCCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGG 124592
||| | ||| || || || | ||| | | || ||||||| | | | |||
Sbjct 8233895 AACATTCATGTGGCAGAGCCAAACTATGGAAAACTCACGTCCATACACTTCTATTCCTGG 8233836
Query 124593 AGCAGC-GGACTCAAAACGGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCAT 124651
| ||| || |||||||| || ||||| ||| | | || || || || || | |||||
Sbjct 8233835 A-AAGCTGGTCTCAAAACTGGAATGTACTACCTGCGCACAAAGCCAGCTGCAAACGCCAT 8233777
Query 124652 TCAATTTACCGTCGACAA 124669
||| || ||||| || ||
Sbjct 8233776 TCAGTTCACCGTGGATAA 8233759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451971994829080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |