Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq5267 147 3e-30
seq5396 127 3e-24
seq4488 122 1e-22
>seq5267
Length=4296760
Score = 147 bits (162), Expect = 3e-30
Identities = 287/419 (68%), Gaps = 4/419 (1%)
Strand=Plus/Plus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
||| || || ||| ||||||||||||||| ||||| || || || ||| |||||||
Sbjct 668460 GTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCAT 668519
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 127349
|| | || |||||||| | || | || ||| || | || | || || ||||
Sbjct 668520 GAAGTTGAAGGGGTTCTTGGTATTGTAGATC-TTGCCAACGCCCAGCTCCACCAGCAGAC 668578
Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409
|||||| ||| | || ||||||| ||||| || | ||||| |||||||||||
Sbjct 668579 GATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATGCCGATGAGGTTTA 668638
Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469
|| | || || || |||| ||| ||| ||| ||||||| || || | ||| ||
Sbjct 668639 CGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCGCGGATGATCTCGA 668698
Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCACAGCAAACTCT 127528
|| || || |||| | || |||| || ||| | ||| ||||| ||
Sbjct 668699 TGATGCGCTCGCGCCTGGGTCGCT-GCACCAAGTGCTGGAACATCAGCACGGCAAAGTCG 668757
Query 127529 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 127588
||| || |||||||| ||||||||||| || || |||||| ||| || ||||| |||
Sbjct 668758 CAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGTCCCGGCATCAGA 668817
Query 127589 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647
|| |||||||||| ||||||||| | || ||| ||||||||| ||||| ||
Sbjct 668818 CCGCGCTTCTTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAAGAAGATGCCCTCGAC 668876
>seq5396
Length=9561034
Score = 127 bits (140), Expect = 3e-24
Identities = 585/912 (64%), Gaps = 21/912 (2%)
Strand=Plus/Plus
Query 115902 ATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 115961
||| || || || ||||| ||||| || | || ||||| |||| |||||||| |||||
Sbjct 8234145 ATAAATATTCGTTGTGTACGGCTCGAAAGATTCGTTGTTGCCCATAATTTGGGCAGTGGA 8234204
Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC 116021
|| |||||||| || || | | ||| ||| |||| ||| | | | ||| ||
Sbjct 8234205 CGCAGTGGGCATAGGCGCAACCAACAGGGAGTTCCGGACACCGTGCTGCTTGATGGACTC 8234264
Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCT---CCCACATATCAAACTG 116078
||| || | |||||| | || |||||| | | | ||||||| || ||||
Sbjct 8234265 CTTCAGTTTCTGCCAGTCCCAA---AGGTTTGTCGGCACTTTGTCCCACATGTCGTACTG 8234321
Query 116079 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 116138
|| || |||| | | | || ||||||| | || ||||||||||| || | || ||
Sbjct 8234322 CAGAATGCCTTTGCTCACGGGACTTCCCTCATAGGTTTCATATGGGCCGTCGATCTGGGC 8234381
Query 116139 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT 116198
|| ||| | || || || ||||| ||| || || || || || || | |||||
Sbjct 8234382 CAGTTCACAACTGGCTTCCAGGGCGCCGTAGTAGATGGTTTCGAATATCTGCTGATTCAA 8234441
Query 116199 TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA-AATAAATACATCCGCGAGAC 116257
||| || || ||| | | || || ||| || ||| | | || |||| |
Sbjct 8234442 GAGACCGGCTTCTTCACTTTCATAGGGGAAAC-GCATAAGAATTAGGGCGTCAGCGAATC 8234500
Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACG 116316
| |||||||||| ||| | || ||||| |||| || || |||| ||| || |
Sbjct 8234501 CCTGGACACCGATGCCCACGGGACGATGCCTCAAGTTGGA-TTTCTTTGCCTCTGGCAGG 8234559
Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376
|| || || || ||||||| | | | || ||||| ||||| || ||| || | |||
Sbjct 8234560 GGGTAGAAGTTTATATCGATGATCTTGTTAAGATTCTTGGTAACCGTCTTGGTAACTTCC 8234619
Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436
| ||| || | | |||| | || |||| | |||| || | ||||||||
Sbjct 8234620 TTAAGTTTCTTGAAATCGTA--TG-TCTTCTCGGGAGTGACGAACATGTTGAGGGCGATG 8234676
Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496
|| |||| || || || | |||| ||| | | |||||| | ||||| || |||
Sbjct 8234677 GATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAGGAGTACTCCACGATTTCTGTGCAC 8234736
Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556
|| || | ||| |||||||| | |||| || || ||| |||| || ||||||
Sbjct 8234737 AAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCC 8234796
Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-- 116614
|| | ||||| || || | || || || || | || | ||| || ||| |
Sbjct 8234797 TTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTGTGCCTCAATAATGGCGAACCACAAG 8234856
Query 116615 CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 116674
|| | || || || |||||| || ||||| | ||| ||||| || |
Sbjct 8234857 GATTG--AGCCTTAACCGTTCGGTTGGCACGACCCTCTTGCTCATACTTCTCATACAACT 8234914
Query 116675 CCTCAAACTCTTC-ACCCACAGCCTC-TGAGAGCCCTGGTGCCTTATCTGGACAGAAGAG 116732
|| || || || |||||| | || ||| || || || |||| ||||| | ||
Sbjct 8234915 TTTCGAATTCATCGCCCCACA-CATCGTGA-AGGCCAGGGCATTTATGCGGACACATTAG 8234972
Query 116733 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792
||||| | ||| |||| || |||||||| ||||| || || ||||| || || |
Sbjct 8234973 TGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCGTA 8235032
Query 116793 GAAGAGATCCCG 116804
||| ||||| ||
Sbjct 8235033 GAACAGATCGCG 8235044
>seq4488
Length=490991
Score = 122 bits (134), Expect = 1e-22
Identities = 173/241 (72%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 175927 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 175986
||| || || ||| | | || || || || ||||| | |||||| || ||||| |||||
Sbjct 138696 ATCCTTTCCGCCCGTCAAGCGAGTACCGAACTGACCGCGTGGCTCCAGCAGATTAATATT 138637
Query 175987 GTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 176045
||||| ||||| | ||| | |||| || || || || ||| || || || || ||||
Sbjct 138636 GTTTGCGCCCACAAAGTTCTGGGCCAGATTAACGATTGTCATCTGC-AGCGAAACCTCAC 138578
Query 176046 CGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCAT 176105
|||| |||||||||||| | || ||||| | | | | ||| |||||||||| ||||
Sbjct 138577 CGTGGTGGTAGGCCGACATCTCGGCCACGGAACCAGATAGCTGGGCCACCTTCACCTCAC 138518
Query 176106 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 176165
|||| ||| | | |||||| | |||| ||||| | ||| ||||| |||||||
Sbjct 138517 GCTTGTCGTTTCTCTTGAAGCAGGTGAACATCACCTTGCGCTGACCTGGCTTCAGGCCGT 138458
Query 176166 C 176166
|
Sbjct 138457 C 138457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613464844996680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |