Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_013599.1 Length=36674 Score E Sequences producing significant alignments: (Bits) Value seq2009 159 8e-35 >seq2009 Length=1133 Score = 159 bits (176), Expect = 8e-35 Identities = 247/351 (70%), Gaps = 4/351 (1%) Strand=Plus/Minus Query 6094 ACCGTCGGATTCCAGAGAATTTGGTAGCTGCTGTGCCCGTTGCGTGAGTACGGAATCGCT 6153 |||| |||||||||||| || ||||||| |||||| ||||| || |||||||| || | Sbjct 357 ACCGCCGGATTCCAGAGGATCTGGTAGCCGCTGTGACCGTTACGCGAGTACGGCATGGAC 298 Query 6154 TCACCCCACATGCG--ACCGGCTTCGGTTAACTCCCACGCGTCGCGTTCATTACGAAATT 6211 || |||| ||| |||||| ||||| | ||||||| |||| || || ||||| || | Sbjct 297 TCGGCCCA--TGCTTCACCGGCCTCGGTCAGCTCCCACTCGTCCCGGTCGTTACGGAACT 240 Query 6212 GCAGGCCGCTGGAGGCTAGTAATTGGTTCGCCGCCTTGGCCGAGCAATGCAGCTGCTTGC 6271 | ||||||| || || || || || || | |||||||| |||| | |||| |||| Sbjct 239 GAAGGCCGCCAGATGCCAGCAACTGATTGGTGGCCTTGGCTGAGCGACTCAGCAATTTGC 180 Query 6272 CTAGTTGCGTGGCGTTGAGCATGCAAAGCGGGTCCCGCAGTGCAGGCAATGCACGGCGTA 6331 | || || ||||||||||| ||| | ||| || |||||||| || ||||| | Sbjct 179 CGAGCTGGGTGGCGTTGAGTGAGCAGATCGGCTCATTGGCGGCAGGCAAAGCGCGGCGCA 120 Query 6332 TCTCTTCGGTTGTTAAATTCGTGTTGCTTTTGATGCAGGCCAGCGTTGCCGCTGCGGCAA 6391 | |||| || || | ||||| | ||||||| || ||| || || |||| Sbjct 119 GCACTTCCGTGGTCAGGCCGGTGTTTTCCTGAATGCAGGTCAACGTGGCAGCCATCGCAA 60 Query 6392 TTCCTGGTTTTACGCCAGTCACTTTGGAAACGAATTGGCCGATTAACAGGA 6442 | || | || ||||| | ||| |||| || || |||||| | ||||| Sbjct 59 TGCCGGTCTTGACGCCCGGCACCTTGGCGACCGCTTCGCCGATCAGCAGGA 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117227511056136