Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_013645.1 Length=34882 Score E Sequences producing significant alignments: (Bits) Value seq1936 170 4e-38 >seq1936 Length=1051 Score = 170 bits (188), Expect = 4e-38 Identities = 410/614 (67%), Gaps = 10/614 (2%) Strand=Plus/Plus Query 1724 GCGAGTTTATGTAGGATTGGATGCATCAATGTTCAGCGATAATACAGCCATTGGCTTCGT 1783 || ||||||| | || || ||| || ||||| || ||||| ||||| | | || || Sbjct 255 GCAAGTTTATATTGGCTTTGATTACTCGATGTTTAGTGATAACACAGCGCTAGCGTTTGT 314 Query 1784 CTATCCATACGTTGGTGAAGATGGAAGTCAAAAATGGCATATCGAACAGCACAGTTTCAT 1843 | ||| || || | | ||| | | | |||| ||| | ||||| || || || Sbjct 315 ATTTCCTTATCGTGATAATAATGATAAACCACGATGGTTTATTTATCAGCATAGCTTTAT 374 Query 1844 TCCTTGGCAGCAAGCAGGTTCGCTTGAGGCTAAGATGGAGCAGGACGGTGTCAATTATCG 1903 ||| |||||| |||| ||||| |||||||||| |||| |||||| | || ||||| Sbjct 375 TCCCTGGCAGAAAGCCGGTTCAATTGAGGCTAAAGAAAAGCAAGACGGTATTAACTATCG 434 Query 1904 AGACTTGGAAGCCAAGGGCTTTTGTACGATTACAAGCCATCCACAAGGGCTTATTAACCC 1963 ||||| | ||||| |||||||| |||| |||||||| ||||| || || || Sbjct 435 GGACTTAGCTCAAAAGGGATTTTGTACAATTAGTAGCCATCCTCAAGGACTAATCAATGA 494 Query 1964 AGAGGAAGTGTATCGCTGGTTTATAGATTATGTTGAAGATAATCAGCTTGATGTCGTTTT 2023 ||| |||| |||| ||||| | | | |||||| ||| || || || ||||| Sbjct 495 CGAGCAAGTTTATCAGTGGTTACTTAACTTTGTTGAGCGGCATCGACTGGAAGTTGTTTT 554 Query 2024 CTTCGGCTATGACGCTATGATGACTGA----TAAAATAATAAAAAGTCTTGAATCTAATA 2079 ||| || |||||||| || | || | || ||| | | || || || | ||| Sbjct 555 CTTTGGTTATGACGCG-TGGGGGCTAACGCCTACAATCA--AGCAG-CTAGATTTAAATT 610 Query 2080 CAAATTTCCCACT-CATGCCAATAAGACAACGTACAAGTGAGCTAAAAGACCCTACAAAA 2138 | || ||| | || |||| | | || || || ||||| | || || || || || Sbjct 611 CCGGTTGGCCATTGCAAGCCATTCGG-CAGCGAACTAGTGAATTGAAGGATCCAACTAAG 669 Query 2139 TTCCTTCAAACGCTATTTATCGAAGGCAATATCACTCGCTTGGATGATGAGATTATGCGT 2198 || | || ||| | ||| | |||||| | |||||||||||| |||||| Sbjct 670 TTTTTGCAGACGATGTTTGTTGAAGGCTCGGTAGACCGCTTGGATGATCGAATTATGGAA 729 Query 2199 AAAGCCTTGATAAATGCTGTGATTAAAGAGGATAACATCGGCATTCAAGTAGACAAAATG 2258 || || || ||||||||| ||| | || || || || || |||||||| || ||| Sbjct 730 AAGGCATTACTAAATGCTGAAATTTATGAAGACAAAATTGGTATTCAAGTCGATAAAGCT 789 Query 2259 AAGTCAACCTATAAGATTGACGTTGTAGATGCCCTTATCGATGCGTTTTATGATGGCATG 2318 ||| | || | |||||||| || |||||||| | || ||||| || | | | | ||| Sbjct 790 AAGGCCACATTGAAGATTGATGTGGTAGATGCGTTAATTGATGCCTTATTTCAGGCTATG 849 Query 2319 TATGCATTTGAAGA 2332 ||| |||||||| Sbjct 850 TATCACTTTGAAGA 863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111493487150344