Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq5376 96.9 3e-14 >seq5376 Length=10037194 Score = 96.9 bits (106), Expect = 3e-14 Identities = 178/261 (68%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 518453 AATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAAT 518512 || ||||||| ||||| || || || ||| ||| | || | | ||||| | Sbjct 4049344 AAGGGCCAGTGCTTCATGTCCGACTGCACAGCGGAGTCCTCGAACTTGCGGCCAATCAGA 4049285 Query 518513 CGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCT 518572 || || ||||| || || || | ||| || || || || | || | ||||| || || Sbjct 4049284 CGCTTGGCATCGAAGATCGTCTGGGTCGGGTTCATCGCCACCTGGTTCTTGGCGGCGTCG 4049225 Query 518573 CCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGA 518632 || |||||| | || || || || || | |||||| |||||||| || |||||||| || Sbjct 4049224 CCGATCAGACGCTCCGTATCGGTGAAGGCAACATAGGATGGAGTGGTACGATTACCCTGG 4049165 Query 518633 TCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTT 518692 || || || || || || || || |||| || | || || || || | || || Sbjct 4049164 TCGTTGGCGATGATCTCGACCTTGCCATGCTGGAACACGCCCACGCACGAGTAGGTGGTG 4049105 Query 518693 CCTAAATCAATACCAATAGCA 518713 || ||||||||||||| |||| Sbjct 4049104 CCCAAATCAATACCAACAGCA 4049084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780548330547238