Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 132 6e-26
seq5120 86.0 7e-12
>seq5396
Length=9561034
Score = 132 bits (146), Expect = 6e-26
Identities = 910/1453 (63%), Gaps = 56/1453 (4%)
Strand=Plus/Plus
Query 109401 CTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCAT 109460
||| | ||| || || ||||| || |||||||||||||| ||||| | || | || ||
Sbjct 8233794 CTTTGTGCGCAGGTAGTACATTCCAGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTAT 8233853
Query 109461 TGAAGAGAGTTTGGAA-AGTGTCGGACTCT-CCATAAACAAGTTCATCGACTGAGACTGA 109518
|| | |||||| | ||| | | |||| ||| | | ||| | ||||||| ||||
Sbjct 8233854 GGACGTGAGTTTTCCATAGTTTGG--CTCTGCCACATGAATGTTGAACGACTGACTCTGA 8233911
Query 109519 TCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAG 109578
|| ||||| || ||||| || ||||| | ||| | |||| ||||||||
Sbjct 8233912 TCTATGAACGCTCCTCGATCTGCGGCCATCTTAATGGTCGACTTCACTGAGATTTCCCAC 8233971
Query 109579 ACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCA 109638
|| || ||||||| || || | | ||| ||| || | || || || || |||||
Sbjct 8233972 ACTGTTTTGTACAGATCGCGGACCTTCTGGGGGATGGCCTCAATATTCTGGATTGAGCC- 8234030
Query 109639 CCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGA 109695
|| || | |||| | | |||||| || | ||| | | | || | ||
Sbjct 8234031 CCTGCTGGAA--ATGATTTGGTTCTTCATGTCGTCGTCCCACAAGTCCAGCTCCGTTAGG 8234088
Query 109696 TCG-TCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTA 109754
|| | ||||| ||| | ||| ||||| ||||| |||| || || | | ||
Sbjct 8234089 TCCCTTAACAA-ATGATGGTTAACCACTTGGAATTCGCCAGACAGAACTCGCCTGGTATA 8234147
Query 109755 GATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGC 109814
|| || || ||||| || |||||| | || |||||||| | ||||| |||||||| ||
Sbjct 8234148 AATATTCGTTGTGTACGGCTCGAAAGATTCGTTGTTGCCCATAATTTGGGCAGTGGACGC 8234207
Query 109815 TGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACG 109874
|||||||| || || | | || ||| |||| ||| | | ||| | |||
Sbjct 8234208 AGTGGGCATAGGCGCAACCAACAGGGAGTTCCGGACACCGTGCTGCTTGATGGACTCCTT 8234267
Query 109875 CATTGCGTCCCAATCATAACGACCACTAAATTTAGTCT-CACCAT--CCCACATATCTGG 109931
|| | | ||| || ||| || || ||| ||| | ||||||| ||
Sbjct 8234268 CAGTTTCTGCCAGTC-------CCA--AAGGTTTGTCGGCACTTTGTCCCACATGTCGTA 8234318
Query 109932 TTGAAGTACACC----CTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAA 109987
|| || | || |||| | ||| |||| | | || || | || || |
Sbjct 8234319 CTGCAGAATGCCTTTGCTCA----CGGGACTTCCCTCATAGGTTTCATATGGGCCGTCGA 8234374
Query 109988 CCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAG 110047
|| ||||| || | || || || || | | || || || || || || ||
Sbjct 8234375 TCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCGTAGTAGATGGTTTCGAATATCTGCT 8234434
Query 110048 CATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCG 110107
||||| ||| | | ||||||| || |||| | || |||||| | | || |
Sbjct 8234435 GATTCAAGAGACCGGCTTCTTCACTTTCATAGGGGAAACGCATAAGAATTAGGGCGTCAG 8234494
Query 110108 CTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGA-------GCGTCGA 110160
| | ||||| ||||||| || | ||| |||||| ||| ||| || || ||
Sbjct 8234495 CGAATCCCTGGACACCGATGCCCACGGGACGATGCCTCAAGTTGGATTTCTTTGCCTCTG 8234554
Query 110161 GCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTC 110220
|||| |||||| ||||| ||||||| | || |||||||| || || |||
Sbjct 8234555 GCAG-------GGGGTAGAAGTTTATATCGATGATCTTGTTAAGATTCTTGGTAACCGTC 8234607
Query 110221 TTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTG 110280
|| || | ||| | ||||| | | ||||| | || ||| || | |||| | ||
Sbjct 8234608 TTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCTTC---TCGGGAGTGACGAACATG 8234664
Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340
||| || || || || | ||||| || | | ||||||| || ||| ||||
Sbjct 8234665 TTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAGGAGTACTCCACG 8234724
Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400
||||| || ||||||||| | ||| ||| || | |||| ||| || || |
Sbjct 8234725 ATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCCTG 8234784
Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460
||||| ||||||||| | |||||||| ||| | |||||||| ||||| || | ||||
Sbjct 8234785 TTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTGTGCCTCAATAATG 8234844
Query 110461 GCCTTCCATAC--ATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACT 110518
|| ||| | || | || || ||| ||| || |||| || | ||| ||||
Sbjct 8234845 GCGAACCACAAGGATTGA--GCCTTAACCGTTCGGTTGGCACGACCCTCTTGCTCATACT 8234902
Query 110519 TGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGG 110578
| ||||| | || ||||| | || ||||||| ||| || || | |
Sbjct 8234903 TCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAGGCCAGGGCATTTATGCG 8234962
Query 110579 GACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCC 110638
|||| | || ||||||| |||| |||| || | |||||| || || || || ||||
Sbjct 8234963 GACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCC 8235022
Query 110639 ACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCT 110698
||| || |||| || || ||| ||| ||| || | || ||| || |
Sbjct 8235023 ACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTGTTCTTCTTAAGTT 8235082
Query 110699 CCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTAC 110758
||| || || | || ||||||||||| || || || || | || | || || ||
Sbjct 8235083 CCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGAC 8235142
Query 110759 GA---CGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAA 110815
| | || |||| | |||||||| || ||||||||||| | ||| ||||
Sbjct 8235143 GCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGACCCTCAACATGGGAA 8235202
Query 110816 TAATTCCATCGGA 110828
| |||| |||
Sbjct 8235203 CCAGGCCATTGGA 8235215
>seq5120
Length=3129309
Score = 86.0 bits (94), Expect = 7e-12
Identities = 75/90 (83%), Gaps = 4/90 (4%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC-GT 136775
||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| ||||
Sbjct 3121319 TAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCGGGTTCGATCCCCTCA 3121378
Query 136776 TGGG--AACAGCTTTT-AGATATATTTTTT 136802
|||| || | ||||| |||||||||||
Sbjct 3121379 TGGGCCAATAACTTTTCTTATATATTTTTT 3121408
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588935338569400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |