Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5396 154 2e-32 >seq5396 Length=9561034 Score = 154 bits (170), Expect = 2e-32 Identities = 884/1395 (63%), Gaps = 36/1395 (3%) Strand=Plus/Plus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| || ||||| ||||| || || || |||| || || |||| ||||| || ||||| Sbjct 8234145 ATAAATATTCGTTGTGTACGGCTCGAAAGATTCGTTGTTGCCCATAATTTGGGCAGTGGA 8234204 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053 || || ||||| || || | ||| || ||| || | ||| | | ||||||| || Sbjct 8234205 CGCAGTGGGCATAGGCGCAACCAACAGGGAGTTCCGGACACCGTGCTGCTTGATGGACTC 8234264 Query 106054 CTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTT-CACCTT--CCCACATATCAAATTG 106110 ||| || | |||||| | || || || ||| || ||||||| || | || Sbjct 8234265 CTTCAGTTTCTGCCAGTCCCAA---AGGTTTGTCGGCACTTTGTCCCACATGTCGTACTG 8234321 Query 106111 AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170 || | |||| | | |||| |||||| | || ||||| | || | | | || Sbjct 8234322 CAGAATGCCTTTGCTCACGGGACTTCCCTCATAGGTTTCATATGGGCCGTCGATCTGGGC 8234381 Query 106171 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230 || |||||| || || ||||||| ||| || |||||||| || || | ||||| Sbjct 8234382 CAGTTCACAACTGGCTTCCAGGGCGCCGTAGTAGATGGTTTCGAATATCTGCTGATTCAA 8234441 Query 106231 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATACATCCGCGAGAC 106289 |||||| || ||| | | | | || || || ||| | | || |||| | Sbjct 8234442 GAGACCGGCTTCTTCACTTTCATAGGGGAAACG-CATAAGAATTAGGGCGTCAGCGAATC 8234500 Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA---CTTTCGCGCAGTCTCAA 106346 | || ||||| | || | || | || | || || || |||| | | | | | Sbjct 8234501 CCTGGACACCGATGCCCACGGGACGATGCCTCAAGTTGGATTTCTTTGCCTCTGGC---A 8234557 Query 106347 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 106406 ||| || || ||| | || |||| ||| ||||| |||||||| |||| || | || Sbjct 8234558 GGGGGTAGAAGTTTATATCGATGATCTTGTTAAGATTCTTGGTAACCGTCTTGGTAACTT 8234617 Query 106407 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGA 106466 | | |||||| | |||| | || |||| | |||| || | ||||||| Sbjct 8234618 CCTTAAGTTTCTTGAAATCGTATGTCT---TCTCGGGAGTGACGAACATGTTGAGGGCGA 8234674 Query 106467 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 106526 | |||||||| ||||| || || |||| ||| | | |||||| | |||||||| | Sbjct 8234675 TGGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAGGAGTACTCCACGATTTCTGTGC 8234734 Query 106527 ACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCAT 106586 |||||||| | ||| || || || | ||||| ||||| ||||| ||||||| |||| Sbjct 8234735 ACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCCTGTTGCAGGCAT 8234794 Query 106587 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 |||| | ||||||||||| | || || || ||||| || | ||| || ||||| Sbjct 8234795 CCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTGTGCCTCAATAATGGCGAACCACA 8234854 Query 106647 --CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704 || | || || | |||||| || ||||| ||| ||||| || | Sbjct 8234855 AGGATTG--AGCCTTAACCGTTCGGTTGGCACGACCCTCTTGCTCATACTTCTCATACAA 8234912 Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764 ||| || || || ||| | | ||| || || || || | ||||| | || Sbjct 8234913 CTTTTCGAATTCATCGCCCCACACATCGTGAAGGCCAGGGCATTTATGCGGACACATTAG 8234972 Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824 ||||| | ||| |||| || |||||||| || || || || |||||||||| | Sbjct 8234973 TGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCGTA 8235032 Query 106825 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA-CTCAAGGAACT 106883 || ||||| | ||| ||| || | || ||| || ||| || ||||||| Sbjct 8235033 GAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTGTT-CTTCTTAAGTTCCAGGAACT 8235091 Query 106884 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGC 106939 | | || |||| |||||| ||||| || || | || | | || | | | || Sbjct 8235092 CAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCG- 8235150 Query 106940 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 106999 || | |||| ||||||||||| ||| || || | | ||| |||| | ||| Sbjct 8235151 CCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGACCCTCAACATGGGAACCAGGCCA 8235210 Query 107000 TCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTCACATCATGGATGTG 107058 | || || || || || | ||| |||| | || |||| | ||||| || Sbjct 8235211 TTGGAAGTGCCGTTCGTGCCGCAAAT-CGAGGTGCCCTTTGCTCGGATGCAATGGACGTT 8235269 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCAC-ACTCCGTAAGAGTTCCATA 107115 | ||||| || || ||| |||| ||||| | |||||| |||| || || | | Sbjct 8235270 AAGTCCAATGCCGCCGGCCGACTTCGAGATCATGGCGCACTGCTCC-ACGGACTT--AAA 8235326 Query 107116 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 107175 || || | ||| ||||| | | ||| | ||||| ||| |||| |||||| | Sbjct 8235327 AATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGAGGAAACAAGACGACAGCTGCGGGCG 8235386 Query 107176 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 107235 ||| |||| || || ||||| | || ||| |||| | | |||| Sbjct 8235387 ATTTGTGGCAGCGGCAAAAAGCGTTGGCGACGCATGAGTGAAGTATCGCTCCGACAAGAG 8235446 Query 107236 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 || || || |||| | | | ||| || || || || ||||| ||||| ||||| ||||| Sbjct 8235447 GTTATAAGTTTCCACGGCTGCATCTATATCCTCTCCATGGATTCCGATCGCCACGCGCAT 8235506 Query 107296 AAACATGTATTGGGG 107310 ||||| | ||| || Sbjct 8235507 CAACATATGTTGCGG 8235521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589940069200520