Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_015273.1 Length=32317 Score E Sequences producing significant alignments: (Bits) Value seq1764 93.3 9e-15 >seq1764 Length=1224 Score = 93.3 bits (102), Expect = 9e-15 Identities = 251/376 (67%), Gaps = 26/376 (7%) Strand=Plus/Plus Query 27791 GACTTTGCGGCCAGCGTTCA-CGGTAGTCCACTCGATCAACAAACCGTTTTTCTCGATCA 27849 ||| |||||||| || || | ||| || ||||| |||| | | |||| |||||| | Sbjct 286 GACCTTGCGGCCCGCCTTGATCGGGAG-CCACTGAATCAGCCAGCCGTCTTTCTCTTGGA 344 Query 27850 GCTCGGTCACGGCCGGCTCGATCACGCGCCGGCGCAGCTCTTTGAAGTTCGCGCGGTGAC 27909 | || ||||||| || ||||| | |||| || |||||||||| || Sbjct 345 GTTCCTTCACGGCGGGTTCGATGATCTTGGTTCGCACCTTGGCGAAGTTCGCGGCCTGCT 404 Query 27910 TCTCTTTCGCATCCATCGCGCGGTGAAATTCTTCGATGCTCGGCGTGTAGCGCCCTTTGC 27969 || | | |||||||||| | | ||| || |||||| | || | |||| | || Sbjct 405 TCGCGGTGGCATCCATCGAGGCGCAAAAGTCCTCGATGGT----GTATTCCGCCGT--GC 458 Query 27970 CCGCCCACGACTTGAAACAC-TCA-----TACAGGCGC---CACGAGTACGCCGAGCGCA 28020 ||| |||| ||| | | ||| | ||| || |||||||| ||||||||| Sbjct 459 CCGTG---GACTGGAAGCGCGTCAGCAGCTCCAGCAGCTTCCACGAGTAGCCCGAGCGCA 515 Query 28021 GCGCGGCCGTTTGCTTGAGCTTGTATGACGTGAATTG---TTGGCGCAGTCCGAACAGGT 28077 |||||| || ||||| |||| ||| | |||||| || || | || |||| ||||| Sbjct 516 GCGCGGACGCTTGCTGTAGCTGGTAGGTCGTGAACTGCGCTTTG---AGGCCGAGCAGGT 572 Query 28078 GCGGGACGACTTCATGCCACCAGTGCAGCTCTACCCATCCCTCGCCCTTGTGATACTCGG 28137 || | | || || ||||||| ||| || ||||| ||||| || | ||| |||| Sbjct 573 GCCGAATGAGATCCGGCCACCATGCCAGTTCGACCCAGCCCTCCCCTTGGTGGTACTTCA 632 Query 28138 CCTTGCCGACCCATCG 28153 || ||||||||| || Sbjct 633 CCGAGCCGACCCAGCG 648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103286025477154