Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq5091 91.5 2e-13 >seq5091 Length=3955622 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/217 (70%), Gaps = 12/217 (6%) Strand=Plus/Minus Query 153781 TTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTT----TGCAACAACAGACAAGTAT 153836 ||||| |||| || || ||||| ||||||| ||||| ||||| | || | || Sbjct 3916657 TTCCTCTGGGCTACGGTGGTCCCCATGCTGGGTTCTTCGCCTGCAAGCAGAGTCTGGT-- 3916600 Query 153837 AAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGTGAAGGTAATAAAG 153894 | | ||| || ||||| || | || ||| | | | || | | |||||| | | Sbjct 3916599 --GCGTTTGATGCCCGGCAGGATGATCGGGGTCACCCGGGACATGG--ACGGTAATGATG 3916544 Query 153895 CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTA 153954 | ||| | || || || || || || |||||||| ||| | || |||||||| || |||| Sbjct 3916543 CCTACCGCTTGGCCCTGCAAACCAGGGAGCAGCACATCCGTAGGGACAAAGCCACGAGTA 3916484 Query 153955 ACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTC 153991 |||||||||| || ||||| || ||||| || ||||| Sbjct 3916483 ACATCTGCACGGCGCAGGCTCTTCTGGCCAACATGTC 3916447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579172812596320