Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq5091 93.3 5e-14 >seq5091 Length=3955622 Score = 93.3 bits (102), Expect = 5e-14 Identities = 176/253 (70%), Gaps = 16/253 (6%) Strand=Plus/Minus Query 158422 GACATTGCTGTAGGTAGTATGCAAAG-GTTTGGTA-TTCCTATGGGATACGGAGGTCCTC 158479 |||||||| || || | | || || || ||| | ||||| |||| ||||| ||||| | Sbjct 3916691 GACATTGCCGTGGGAACTT--CACAGCGTCTGGGAGTTCCTCTGGGCTACGGTGGTCCCC 3916634 Query 158480 ATGCTGCATTCTT----TGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATT 158535 |||||| ||||| ||||| | || | || | | ||| || ||||| || Sbjct 3916633 ATGCTGGGTTCTTCGCCTGCAAGCAGAGTCTGGT----GCGTTTGATGCCCGGCAGGATG 3916578 Query 158536 GTAGG--TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTA 158593 | || ||| | | | || | | |||||| | || ||| | || || || || || | Sbjct 3916577 ATCGGGGTCACCCGGGACATGG--ACGGTAATGATGCCTACCGCTTGGCCCTGCAAACCA 3916520 Query 158594 GAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGC 158653 | |||||||| ||| | || |||||||| || |||||||||||||| || || || || | Sbjct 3916519 GGGAGCAGCACATCCGTAGGGACAAAGCCACGAGTAACATCTGCACGGCGCAGGCTCTTC 3916460 Query 158654 TGGCTAATATGTC 158666 |||| || ||||| Sbjct 3916459 TGGCCAACATGTC 3916447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588010602415280