Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5402 134 3e-26 seq5396 134 3e-26 seq5238 129 1e-24 >seq5402 Length=10656099 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || ||||| || || || |||||||| | |||||| | || || ||||||||||| || Sbjct 571441 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCCTCGAGCTGCTTGCCG 571500 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| || || || || ||||| ||||| || || ||||| || || || ||| Sbjct 571501 GCGAAGATCAGACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTC 571560 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 |||||||| |||||||| || ||||| || ||||| | ||||| || |||||||| Sbjct 571561 ACGTTCTCGATGGTGTCAGATGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAAAGTC 571620 Query 195124 TTTACGAACACTTGCAT 195140 || || || | ||||| Sbjct 571621 TTGACAAAGATCTGCAT 571637 >seq5396 Length=9561034 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| | ||||||||| || ||||| || || || | || || | |||||||| ||||| Sbjct 8331054 GTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTG 8330995 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || || ||||||||||| ||||||||||| ||||| || Sbjct 8330994 CTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTT 8330935 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || || || || |||||| ||| || ||||| || | ||||| || || Sbjct 8330934 GGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGCGTGATGGTCTTGCCCGT 8330875 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 8330874 GAGGGTCTTAACGAAGATCTGCAT 8330851 >seq5238 Length=3592495 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| || || | || || || Sbjct 2679442 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCC 2679383 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || ||||| || ||||| || ||||| || Sbjct 2679382 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGG 2679323 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || ||||| |||||||||||| ||||| || | ||| | ||||| Sbjct 2679322 ATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTCTTG 2679263 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| ||||| | |||||| Sbjct 2679262 CCGGTGAGGGTTTTCACGAAGATTTGCAT 2679234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109403089268141