Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_016161.1 Length=38013 Score E Sequences producing significant alignments: (Bits) Value seq1921 80.6 6e-11 >seq1921 Length=1143 Score = 80.6 bits (88), Expect = 6e-11 Identities = 105/144 (73%), Gaps = 6/144 (4%) Strand=Plus/Minus Query 26574 GCACCGTCCTCATAATCAAGGGCCACAATCGAGCCCTTGGGCGTCTGAACCTTTGGCAAC 26633 |||||||||||||| || || || ||||| |||||||| |||| ||| |||||| Sbjct 1002 GCACCGTCCTCATAGTCTAGTGCGACAATACTACCCTTGGGTGTCTTAACACGTGGCAA- 944 Query 26634 ATGTAAT---CAAGCATTGCCTTGGCTTGTGACTTACTGGAACCAAACTCGCCCCATAAA 26690 ||||| | | ||| |||||||| | | | || || ||||| | || |||||||| Sbjct 943 --GTAATAGGCCATCATCGCCTTGGCATTGGTCATATTGCCACCAACCCCGTCCCATAAA 886 Query 26691 TACGTGTGGGCGCGCTTACCGGCC 26714 || ||||| | || ||||| ||| Sbjct 885 TAGGTGTGCACCCGTTTACCAGCC 862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121512030034850