Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_018285.1 Length=40758 Score E Sequences producing significant alignments: (Bits) Value seq1936 179 1e-40 >seq1936 Length=1051 Score = 179 bits (198), Expect = 1e-40 Identities = 499/760 (66%), Gaps = 4/760 (1%) Strand=Plus/Plus Query 27327 GATAAGAGAGACGCTGACCTTTTATCTGGAAATATCAACGATTTTATAATCAAGAATATG 27386 |||||| | || ||||| || || || | ||||||||||| || ||| || | Sbjct 106 GATAAGCGCGATTCTGACGCCTTGTCGGGCACACTCAACGATTTTCAAAACAAAAACCTT 165 Query 27387 AACCTTTGGGGCGAACAAGATGAAAACAGCTTCTTAAAGCTGGAAGACATCGAGCGCTCG 27446 ||| | ||| |||||| |||||||||| || ||| ||| | ||||| | Sbjct 166 AACTTGTGGCTAGAACAATCGACCGACAGCTTCTTGAAACTGCCTGACGTTGAGCGAGCT 225 Query 27447 GTCATTTC-TGATTTTGATATACGTGGCAGACGTGTTTATGTTGGGCTTGATGCCTCAAT 27505 | || || | |||| | | | || | | |||||| |||| ||||| ||| || Sbjct 226 ATTATATCATCATTTAG-TTTTGATGATCGGCAAGTTTATATTGGCTTTGATTACTCGAT 284 Query 27506 GTTTAGCGACAACACCGCAATTGGCTTTGTCTATCCTTATCTAGGGGCAGACGGTAGCCA 27565 |||||| || ||||| || | | ||||| | |||||||| | | | || | Sbjct 285 GTTTAGTGATAACACAGCGCTAGCGTTTGTATTTCCTTATCGTGATAATAATGATAAACC 344 Query 27566 AAAATGGCATATAGAACAGCATAGTTTCATTCCGTGGCAACAAGCAGGCTCACTTGAAGC 27625 | |||| ||| | |||||||| || ||||| ||||| |||| || ||| |||| || Sbjct 345 ACGATGGTTTATTTATCAGCATAGCTTTATTCCCTGGCAGAAAGCCGGTTCAATTGAGGC 404 Query 27626 CAAAGAAAAACAAGACGGGGTTAACTATCGAGATTTGGAAACCAAGGGTTTTTGTACGAT 27685 |||||||| |||||||| |||||||||| || || | ||||| |||||||| || Sbjct 405 TAAAGAAAAGCAAGACGGTATTAACTATCGGGACTTAGCTCAAAAGGGATTTTGTACAAT 464 Query 27686 TACAAGCCACCCACAAGGGCTTATTAACCCAGAGGAAGTGTACCGTTGGTTTTGTGAGTA 27745 || ||||| || ||||| || || || ||| |||| || | ||||| | | | Sbjct 465 TAGTAGCCATCCTCAAGGACTAATCAATGACGAGCAAGTTTATCAGTGGTTACTTAACTT 524 Query 27746 TGTGGAGGATAATCAGCTTGATGTGGTCTTCTTTGGCTACGATGCTATGGGAGTATCAAA 27805 ||| ||| ||| || || || || |||||||| || || || ||| || | Sbjct 525 TGTTGAGCGGCATCGACTGGAAGTTGTTTTCTTTGGTTATGACGCGTGGGGGCTAACGCC 584 Query 27806 GATTATCAAAGCGTTGGAATCTAACACTAGCTTTCCACT-TATGCCAATTAGACAACGGA 27864 | ||||| | | || | || | | | ||| | | ||| ||| | || || | Sbjct 585 TACAATCAAGCAGCTAGATTTAAATTCCGGTTGGCCATTGCAAGCC-ATTCGGCAGCGAA 643 Query 27865 CCAGCGAACTAAAAGACCCTACAAAATTCCTTCAAACGTTATTTATCGAAGGCAATATCA 27924 | || ||| | || || || || || || | || ||| | ||| | |||||| | Sbjct 644 CTAGTGAATTGAAGGATCCAACTAAGTTTTTGCAGACGATGTTTGTTGAAGGCTCGGTAG 703 Query 27925 CTCGCCTTGATGATGAAATTATGCGAAAAGCCTTGATAAATGCTGTGATTAAGGAAGATA 27984 ||| | |||||| ||||||| ||| || || ||||||||| ||| | ||||| | Sbjct 704 ACCGCTTGGATGATCGAATTATGGAAAAGGCATTACTAAATGCTGAAATTTATGAAGACA 763 Query 27985 ACATCGGTATTCAAGTCGATAAAATGAAATCGACCTATAAAATCGACGTTGTGGATGCTC 28044 | || |||||||||||||||||| || | || | || || || || || ||||| Sbjct 764 AAATTGGTATTCAAGTCGATAAAGCTAAGGCCACATTGAAGATTGATGTGGTAGATGCGT 823 Query 28045 TTATCGATGCGTTTTATGATGGCATGTATGCGTTCGAAGA 28084 | || ||||| || | | | | |||||| || ||||| Sbjct 824 TAATTGATGCCTTATTTCAGGCTATGTATCACTTTGAAGA 863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130295453930720