Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq4493 87.8 1e-12 >seq4493 Length=3184771 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 13651 ATTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCG 13710 || ||| ||||| || || || | | ||||| | ||| | || || |||| | || Sbjct 604277 ATCGAACTTTCGCTTGCACCCCTGGTAGTTCATATATCGCACCTTGCCGAAGATGGCCCG 604336 Query 13711 CTCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTT 13770 |||| ||||| | ||||| ||| | || ||||||||||| ||| |||| ||||| Sbjct 604337 CTCCTTCCAGCCCATGTCGTGGACTCCCCCAATGGACCACATGCAGCCGACATAGCCGTT 604396 Query 13771 GGGATCGCGTCCATCCAAACTGTATTTGTCGTT 13803 |||||||||||| || | ||||| |||||||| Sbjct 604397 GGGATCGCGTCCGTCGAGGCTGTACTTGTCGTT 604429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396251725881711