Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq5120 120 4e-22 >seq5120 Length=3129309 Score = 120 bits (132), Expect = 4e-22 Identities = 158/218 (72%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 197073 CTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCC 197132 || ||| |||| || |||||||| || || || | || || ||||| |||| || Sbjct 1579604 CTCGTTTTCGGTATCATAACAGGCAAGCAAAAATCCTCCATACGTTCCAGTTCGTCGGCC 1579663 Query 197133 CACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTA 197192 | || ||| |||| || || |||||||||||||| | ||||| || ||||| Sbjct 1579664 CTTGCCTTTGTAGCCGCCTATCACCACCAGATCCAGTGAGTCGCCTACATTAGATATGTA 1579723 Query 197193 ATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTAC 197252 ||| ||||||| ||| ||||| | | |||||||||||| ||||| ||||| || | | Sbjct 1579724 ATCCTTCTTCAATTTTAGCCAATTCCGAGATCTCTTGGCTATCTCATAGGTGGCCTCCTC 1579783 Query 197253 GTCCAGGGTCTTGATCATCAATCCCTCGCAATCTTCCT 197290 ||| || ||||| | ||| | |||||||||| ||||| Sbjct 1579784 GTCTAGAGTCTTTACCATGAGACCCTCGCAAT-TTCCT 1579820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676682880280240