Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_019457.1 Length=44492 Score E Sequences producing significant alignments: (Bits) Value seq1953 138 3e-28 >seq1953 Length=1017 Score = 138 bits (152), Expect = 3e-28 Identities = 162/218 (74%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 10845 CAAAAGTGGCCGAAGTCAGGTTGTGTTATTGGACCCATCCGCACAGTCGCATGGCGAATC 10904 ||||| ||| || | |||||||||| ||||||| ||| |||| ||||| | Sbjct 425 CAAAAATGGGCGCACGCAGGTTGTGTGTCTGGACCCCGGCGCCGCATCGCCTGGCGCTTG 484 Query 10905 CTCGATGCCCAATATTTCGGATTGGCCCAACGACGCAAGCGTGTGTTTGTTGTCGCAAGT 10964 |||||||| ||||||||||| | |||||||| ||| || |||||| |||| |||||| Sbjct 485 CTCGATGCTCAATATTTCGGCGTCGCCCAACGGCGCCGTCGCGTGTTTCTTGTGGCAAGT 544 Query 10965 GCTCGAAAAGGATTCGATCCCGCAGAAGTATTATTTGAGCGCGAAGGCGTGCGAAGGGAT 11024 | | || || |||||||||| || ||| | ||||||||| |||| |||| ||||| Sbjct 545 GGTGGAGGTGGCGTCGATCCCGCCGAGGTACT-TTTGAGCGCCCAGGCCTGCGCGGGGAT 603 Query 11025 TCTGCGCCGAGCCGAGAAGCGTTGCAAGAAGCTGCCGG 11062 ||| ||||| || | ||| |||||| |||||||| Sbjct 604 TCTTCGCCGGGCTTCGCGCCGTGGCAAGACGCTGCCGG 641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142243470261204