Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq5267 309 6e-79
seq5396 212 1e-49
>seq5267
Length=4296760
Score = 309 bits (342), Expect = 6e-79
Identities = 572/827 (69%), Gaps = 19/827 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || ||||| | ||||| |||||||| ||||| || |||| |||||| ||||
Sbjct 668457 CTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGCGAGATCATCTC 668516
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957
||||||| ||||||||| || || || | | || || ||||| || ||||||
Sbjct 668517 CATGAAGTTGAAGGGGTTCTTGGTATTGTAGATCT-TGCCAACGCCCAGCTCCACCAGCA 668575
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
| ||||||| ||| | |||||||| | ||||||||| | |||||||| ||||||
Sbjct 668576 GACGATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATGCCGATGAGGT 668635
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
|||||||| || | ||||| ||||||| |||||| ||| || || | | ||||
Sbjct 668636 TTACGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCGCGGATGATCT 668695
Query 48078 GCTTAACGCGGGACTCTGAG---GGTTTGTTGCGC-AGGTGCTTGGCATAGAGCATGCA- 48132
| | ||| ||| | | || | | ||| | | ||||| | | | || |||
Sbjct 668696 CGATGATGCG---CTC-GCGCCTGGGTCGCTGCACCAAGTGCTGGA---ACATCA-GCAC 668747
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
||||||||| | ||||| ||| ||||| ||| ||||||| ||||||||||| || ||
Sbjct 668748 GGCAAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGTCC 668807
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
||||| | || | || || ||||||||||| | ||||| ||| |||||||||
Sbjct 668808 CGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAAGAAGAT 668867
Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312
|||||| || || || || || ||| | ||| ||||| || |||| |||||
Sbjct 668868 GCCCTCGACGGCGGCAAAGGCAATGATGCGCTCCCCGAAGTTGGCCGCCTTGGAGGAGAT 668927
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372
||||||||| |||||||| ||||| ||| | ||||| ||||| ||||| |||
Sbjct 668928 CCAGGAAAGGGCCCAGTCCGCCTTGCGCTTCACAGCGGGCATTGTCTCGATGGCGTTGAA 668987
Query 48373 GAGCTTCTTGCACTCACCTGCG--TCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430
|| | | || || |||| ||| | ||||| || |||| |||||||
Sbjct 668988 CAGGTATTCGCGCT--GGTGCGGATCCCGGATGTAGGTGTCGATCAGCACACTGTACATC 669045
Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490
|| |||||||| ||||| || ||||||||||| || |||||| | ||||| | |
Sbjct 669046 TCCGAGTGCACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCGAGCCTCCGTGATC 669105
Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550
||||| || | ||| | ||| | ||| ||||| || || || ||||| || || ||
Sbjct 669106 TGCACCTCCTGGCTGAAGCGCTCGACCAGGTTCTCGTTAACGATGCCATCGGAGGCGGCG 669165
Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCC 48610
|||||||| || || || | ||| |||||||||| || | || | |||| |
Sbjct 669166 AAGAAGGCCAGCACGTGCGAGATGAAGTGGCGCTCGTCGTCCTTCAGGCGGTGCCAGTCG 669225
Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
| ||| ||| || ||||| || ||||| |||||||| || ||
Sbjct 669226 GTCAGGTCCTTGGAGAGATCCACCTCCTCCACGGTCCAGAAAGAGGC 669272
>seq5396
Length=9561034
Score = 212 bits (234), Expect = 1e-49
Identities = 857/1323 (65%), Gaps = 68/1323 (5%)
Strand=Plus/Plus
Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTG 212963
||| |||| || | ||||| || || || || || | ||| |||| || | |||
Sbjct 8234101 TGATGGTTAACCACTTGGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTG 8234160
Query 212964 TAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGA 213023
|| ||||||| |||||||| |||| ||| || |||||| || |||||||| ||
Sbjct 8234161 TACGGCTCGAAAGATTCGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGC 8234220
Query 213024 GCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGA-AGCT-CTGCCC 213081
|| |||| || ||||| || ||||||| |||| | | || || | |||||
Sbjct 8234221 GCAACCAACAGGGAGTTCCGGACACCGTGCTGCTTGATG-GACTCCTTCAGTTTCTGCC- 8234278
Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTC-CTTCACGTTCCACATGTCAAACTGCAAGATG 213140
||||||| || | | ||| | ||| || ||||||||| |||||| |||
Sbjct 8234279 AGTCCCAA-----AG---GTTTGTCGGCACTTT--GTCCCACATGTCGTACTGCAGAATG 8234328
Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200
|||||||||||||| || |||| || | || ||||| | || |||||| ||
Sbjct 8234329 CCTTTGCTCACGGGACTTCCCTCATAGGTTTCATATGGGCCGTCGATCTGGGCCAGTTCA 8234388
Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGA-------- 213252
|| || | |||||| |||||||||||||||| ||||||| | || |
Sbjct 8234389 CAACTGGCTTCCAGGGCGCCGTAGTAGATGGTTTCGAATATCTGCTGATTCAAGAGACCG 8234448
Query 213253 GCTTCTTGGCCTC--TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAG 213310
||||||| | | | ||| ||| |||| | || | || | ||||| |
Sbjct 8234449 GCTTCTTCACTTTCATAGGG----GAAACGCATAAGAATTAG--GG----CGTCAGCGAA 8234498
Query 213311 CCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAA 213370
|||||||| |||||||| | ||| | || |||| ||| || || ||| ||
Sbjct 8234499 TCCCTGGACACCGATGCCCACGGGACGATGCCTCAAGTTGGATTTCTTTGCCTCTGGCAG 8234558
Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430
|||||| ||||| |||||||||||||| || || ||| || ||||| || |
Sbjct 8234559 GGGGTAGAAGTTTATATCGATGATCTTGTTAAGATTCTTGGTAACCGTCTTGGTAACTTC 8234618
Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGAT 213490
|| | || | || | | || | | | || || ||| ||||||||
Sbjct 8234619 CTTAAGTTTCTTGAAATCGTAT--GTCTTCTCGGGAGTG-ACGAACATGTTGAGGGCGAT 8234675
Query 213491 GCTGGCCAGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTACTCCATGATCTCGGT 213547
| |||| |||||| || || | ||| | ||||| | |||||||| ||| || ||
Sbjct 8234676 GGATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAG---GAGTACTCCACGATTTCTGT 8234732
Query 213548 GCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA 213607
||||| ||||||||| ||||||||| | ||||| ||||| ||| |||| |
Sbjct 8234733 GCACAAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCCTGTTGCAGGC 8234792
Query 213608 ATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCA 213667
|||||| | |||||||||||| || || || | ||| | | | | || | |||
Sbjct 8234793 ATCCTTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTGTGCCTCAATAATGGCGAACCA 8234852
Query 213668 GAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTA 213727
| | | ||||| ||| || || || || | || || |||| || ||
Sbjct 8234853 CAAGGATTGAGCCTTAACCGTTCGGTTGGCACGACCCTC--TTGC-TCATACTTCTCATA 8234909
Query 213728 GAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG-ATGCGGGACACA 213786
| || | |||||| | |||||| || || || || || || |||||| |||||
Sbjct 8234910 CAACTTTTCGAATTCATCGCCCCACACATCGTGAAGGCCAGGGCATTTATGCGG-ACACA 8234968
Query 213787 TGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846
| || ||| || || | | ||| | || ||| || || || || | |||||| |
Sbjct 8234969 TTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAGGG 8235028
Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906
|| |||||| || | || | |||| ||| || | ||| || || || || |
Sbjct 8235029 CGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTGTTCTTCTTAAGTTCCAGGA 8235088
Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTGC 213966
| ||||||| ||||| |||||| ||||||| ||| ||||||||||| || || | |||||
Sbjct 8235089 ACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGC 8235148
Query 213967 CG---CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCC 214023
|| ||||| || || | ||||| ||||||||| | || | ||| ||||| |
Sbjct 8235149 CGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGACCCTCAACATGGGAACCAGGC 8235208
Query 214024 CGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCC----CTCAGGTTGCTC 214079
| ||||| ||||| | | |||| | || ||| || | || ||| || |||
Sbjct 8235209 CATTGGAAGTGCCGTTCG-TGCCGC-AAAT-CGA---GGTGCCCTTTGCTC-GGATGC-A 8235260
Query 214080 ATGGA----GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGT 214135
||||| || || ||||| ||||| |||| |||||||||||||| || ||| |
Sbjct 8235261 ATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATCATGGCGCACTGCTCCACGGA 8235320
Query 214136 CTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTG 214195
|| | ||||| | ||| ||| |||| | | ||| | ||| || ||| |||||
Sbjct 8235321 CTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGAGGAAACAAGACGACAGCTG 8235380
Query 214196 GGG 214198
||
Sbjct 8235381 CGG 8235383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931468489304320
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