Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq5267 208 1e-48
>seq5267
Length=4296760
Score = 208 bits (230), Expect = 1e-48
Identities = 532/814 (65%), Gaps = 11/814 (1%)
Strand=Plus/Minus
Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571
|||||||| || ||| | ||||| |||||||| || || |||| || || |
Sbjct 669264 CTGGACCGTGGAGGAGGTGGATCTCTCCAAGGACCTGACCGACTGGCACCGCCTGAAGGA 669205
Query 25572 AGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGT 25631
||||||| || || || | ||||| |||| ||||| || ||||| ||||| || ||
Sbjct 669204 CGACGAGCGCCACTTCATCTCGCACGTGCTGGCCTTCTTCGCCGCCTCCGATGGCATCGT 669145
Query 25632 GAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTT 25691
|||||||| ||| |||| | |||| | ||| |||||| | |||||| || ||
Sbjct 669144 TAACGAGAACCTGGTCGAGCGCTTCAGCCAGGAGGTGCAGATCACGGAGGCTCGCTGCTT 669085
Query 25692 CTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT 25751
||| || |||||||| ||||| || || |||||||| ||| |||| || | |||||
Sbjct 669084 CTATGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGTA---CAGTGTGCTGAT 669028
Query 25752 G---ACGTACATTACAGACGTCGC-CGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACA 25807
|| ||||| || ||| | || | || ||||| ||||||||| |
Sbjct 669027 CGACACCTACATCCGGGATC-CGCACCAGCGCGAATACCTGTTCAACGCCATCGAGACAA 668969
Query 25808 TACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTA 25867
| ||| | ||| | |||||| |||||| | |||||| | | || || |
Sbjct 668968 TGCCCGCTGTGAAGCGCAAGGCGGACTGGGCCCTTTCCTGGATCTCCTCCAAGGCGGCCA 668909
Query 25868 CGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGT 25927
|| || ||||| | | |||||||| || || ||||||||||| |||||||| |
Sbjct 668908 ACTTCGGGGAGCGCATCATTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGCAGCT 668849
Query 25928 TTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACG 25987
| || |||| |||||||| ||| || || ||||| || ||| ||| |||||||
Sbjct 668848 TCGCCTCCATTTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGACTGACCTTCTCCAACG 668789
Query 25988 AGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCC 26047
|||||||| | | |||||||| || ||| | || |||||| ||| | | | | |
Sbjct 668788 AGCTCATCTCCCGCGACGAGGGCCTGCACTGCGACTTTGCCGTGCTGATGTTCCAG---C 668732
Query 26048 ACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGA 26107
||||| | || ||| | ||| | || | |||||| || ||||||| |
Sbjct 668731 ACTTGGTGCAGCGACCCAGGCGCGAGCGCATCATCGAGATCATCCGCGATGCTGTGGCCA 668672
Query 26108 TCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC 26167
| ||| ||||||| | | |||||||| | |
Sbjct 668671 TAGAGCAGGAGTTCCTCACCGATGCCTTGCCCGTAAACCTCATCGGCATGAATTGCGACC 668612
Query 26168 TCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCA 26227
||||| || ||||| || | ||||| || | ||||||| ||||||| | | ||
Sbjct 668611 TCATGTCGCAGTACATCGAATTCGTGGCGGATCGTCTGCTGGTGGAGCTGGGCGTTGGCA 668552
Query 26228 GACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGA 26287
|||||| ||| ||||| ||| |||| ||||| | || ||| |||| || ||||
Sbjct 668551 AGATCTACAATACCAAGAACCCCTTCAACTTCATGGAGATGATCTCGCTGGACGGCAAGA 668492
Query 26288 CCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|||||||||| || |||| ||| ||||| || ||
Sbjct 668491 CCAACTTCTTCGAGAAGAAGGTGGGCGAGTACCA 668458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928780674877120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |