Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_019522.1
Length=48454
Score E
Sequences producing significant alignments: (Bits) Value
seq1953 100 9e-17
>seq1953
Length=1017
Score = 100 bits (110), Expect = 9e-17
Identities = 274/415 (66%), Gaps = 10/415 (2%)
Strand=Plus/Plus
Query 17245 CGCGCCAGATATTTTAATCGGCGGCACGCCATGTCAGGCGTTTAGCGTGTCAGGCAGGCG 17304
||||||||| | | ||||||||||||| || ||| |||| |||||| | ||| ||
Sbjct 157 CGCGCCAGACCTCCTGGTCGGCGGCACGCCGTGCCAGTCGTTCAGCGTGGCCGGCGCCCG 216
Query 17305 GGAGGGTTTAAGCGACCCGCGAGGCCAATTAACGCTGGCGTTTGTTGATATTGCTGATGC 17364
|| | |||||||| ||| | || || || | ||| || |||| ||||
Sbjct 217 CCGTGGCCTGGCTGACCCGCGCGGCGCCCTGACCCTTGCCTATGTGGAGCTTGCAAATGC 276
Query 17365 AATAGACGATGTGAGA----AAGGGCGCAGACCAGCCAGAATCAATTATTGTTTGGGAAA 17420
|| ||| | | ||| ||| | || ||| | ||| | || |||||||
Sbjct 277 CATCGACCAAACCCGCCGCCAAGACCGCCGCCC-GCCGG---CAACGCTCGTCTGGGAAA 332
Query 17421 ACGTAACAGGAGTATTAAAC-AGTGCAGACAACGCATTCGGTTGTTTTCTCGGCGCGCTG 17479
|||| | || || | | | | |||| |||||| ||||| || || || || |||
Sbjct 333 ACGTCCCCGGCGTCCTCAGCGACCGCAG-CAACGCCTTCGGACACTTCCTGGGAGCACTG 391
Query 17480 GCCGGGGAAAGTAGCGCATTACAGCCAGCAAGGGGAAGATGGCCGAACGCTGGTATTGTG 17539
||||| ||||| | || | | || || || || |||| || |||| ||| ||||
Sbjct 392 GCCGGCGAAAGCCGTGCGCTCGAACCGCCAGGGCAAAAATGGGCGCACGCAGGTTGTGTG 451
Query 17540 TCTGGACCATCGCGCACCGTCGCTTGGCGAGTTCTCGACGCTAAATATTTCGGAGTCCCC 17599
|||||||| |||| | |||| ||||| | ||||| ||| |||||||||| ||| ||
Sbjct 452 TCTGGACCCCGGCGCCGCATCGCCTGGCGCTTGCTCGATGCTCAATATTTCGGCGTCGCC 511
Query 17600 CAACAGCGTAAGCGAGTGTTCGTTATTGCCAGCGCTCGACCAGACTTCGATCCCG 17654
|||| ||| || ||||| || | || || | | || | | |||||||||
Sbjct 512 CAACGGCGCCGTCGCGTGTTTCTTGTGGCAAGTGGTGGAGGTGGCGTCGATCCCG 566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 154921038740416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |