Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_019916.1 Length=38002 Score E Sequences producing significant alignments: (Bits) Value seq1921 80.6 6e-11 >seq1921 Length=1143 Score = 80.6 bits (88), Expect = 6e-11 Identities = 105/144 (73%), Gaps = 6/144 (4%) Strand=Plus/Plus Query 18599 GGCTGGCAAGCGCGCCCACACGTATTTATGGGGCGAGTTTGGTTCCAGTAAGTCACAAGC 18658 |||||| || || | ||||| |||||||||| || | ||||| || || | | | || Sbjct 862 GGCTGGTAAACGGGTGCACACCTATTTATGGGACGGGGTTGGTGGCAATATGACCAATGC 921 Query 18659 CAAGGCAATGCTTG---ATTACATGTTGCCAAAGGTTCAGACGCCCAAGGGCTCGATTGT 18715 |||||| ||| | | ||||| |||||| ||| |||| |||||||| ||||| Sbjct 922 CAAGGCGATGATGGCCTATTAC---TTGCCACGTGTTAAGACACCCAAGGGTAGTATTGT 978 Query 18716 GGCCCTTGATTATGAGGACGGTGC 18739 || || || |||||||||||||| Sbjct 979 CGCACTAGACTATGAGGACGGTGC 1002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121476832343464