Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 120 2e-21
seq5114 98.7 6e-15
>seq5396
Length=9561034
Score = 120 bits (132), Expect = 2e-21
Identities = 132/176 (75%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
||||| |||| || || | | |||||| || ||||| ||||| || || ||||| ||
Sbjct 8331029 TTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGC 8330970
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
||||| |||||||||||||| ||||| |||||||| ||||||| ||| ||||||||
Sbjct 8330969 TGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCC 8330910
Query 480714 GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| || ||||| || || || || || ||||| ||||||||||| || ||
Sbjct 8330909 GAAGGTTCGACCTCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTG 8330854
>seq5114
Length=3386121
Score = 98.7 bits (108), Expect = 6e-15
Identities = 252/381 (66%), Gaps = 2/381 (1%)
Strand=Plus/Minus
Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852
|||||||| || ||||| || ||||||||||| | || || || ||| | || || | |
Sbjct 227403 AATCCTGACGAGGCTGTCGCCTATGGAGCTGCCATTCAGGCGGCCATTCTGTCGGG-CGA 227345
Query 475853 TCAGACGAGA-AACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCT 475911
||| || || | || | || | || || || ||| | || || || || || |
Sbjct 227344 CGAGAGCAGTCAAATCAAGGACGTTCTCCTGGTGGATGTAGCCCCTCTCTCGTTGGGCAT 227285
Query 475912 TGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAA 475971
||| || | || ||| | ||||| || || ||||| | || | | |||||||||||
Sbjct 227284 TGAGACCGCCGGCGGGGTGATGACCAAGCTGATTGAGCGCAACAGCCGCATCCCATGCAA 227225
Query 475972 AAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTT 476031
| || || || |||| || | || || || | | || |||||||| | ||
Sbjct 227224 GCAGTCTAAGACCTTCACCACCTACGCGGACAACCAGCCGGCGGTGACCATCCAGGTGTT 227165
Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091
|| || ||| | |||| || || || ||| || || || || || || ||
Sbjct 227164 CGAGGGCGAACGCGCTCTCACCAAGGACAACAACGTGCTGGGCACCTTCAACCTGACGGG 227105
Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151
||||| || |||||||| ||||| || | || || || || || || | ||||| ||
Sbjct 227104 CATTCCGCCCGCTCCCAGGGGAGTGCCCAAGATCGATGTCACCTTCGACCTGGATGCTAA 227045
Query 476152 TGGTATTCTTAATGTTACTGC 476172
|||||| || ||||| || ||
Sbjct 227044 TGGTATCCTGAATGTGACCGC 227024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267942291732404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |