Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_021221.1 Length=45781 Score E Sequences producing significant alignments: (Bits) Value seq5396 80.6 8e-11 >seq5396 Length=9561034 Score = 80.6 bits (88), Expect = 8e-11 Identities = 81/104 (78%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 1135 GTTCCCGAAGGGGGTCTATGGGCGTCTCGCTCCTCGTTCGGGGCTGGCGGTGAAACACTT 1194 |||||||| ||| ||| || || | ||||| || || |||||||| ||||| |||| Sbjct 2096370 GTTCCCGA-GGGCTCCTACGGACGAGTGGCTCCGCGATCAGGGCTGGCCGTGAAGAACTT 2096312 Query 1195 TATCGATGTGGGGGCGGGCGTGATAGACGGCGACTATCGAGGCA 1238 ||||||||||| || |||||| | |||| |||||||| |||| Sbjct 2096311 CATCGATGTGGGTGCCGGCGTGGTGGACGAGGACTATCGCGGCA 2096268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146367999733618