Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4739 123 7e-23 >seq4739 Length=5756469 Score = 123 bits (136), Expect = 7e-23 Identities = 187/263 (71%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || | ||||||||| || ||||| ||| || || || ||||| ||| Sbjct 555113 TCCATAGCCTTTATAAGACGACGCTGGATGTAACCGGTTTCAGCAGTCTTCACAGCGGTA 555172 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 ||||| ||||| ||||||||||||| || |||||| | | ||| ||| || || Sbjct 555173 TCAATGAGACCCTCACGACCACCCATGGCGTGGAAGTAGAACTCCGAGGGTGTCAGGCCG 555232 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTA 302751 | | | | ||| |||| ||||| ||||| | ||| || || ||||||| ||| | Sbjct 555233 GCCAGATACGAGTTCTCCACGAAGCCACGGGACTCAGGACCGTAATCGTC---TTTGATG 555289 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| || || || | || | ||||| ||||| ||||| || || ||||||||| Sbjct 555290 AAGTGGGGGAGAGTGCGCTTGCGGAAACCGTAGGGGATTCGCTTACCCTCCACGTTCTGC 555349 Query 302812 TGTCCCAGGCACGAAATCATCTG 302834 || |||| || | ||| | ||| Sbjct 555350 TGGCCCACACAAGCAATAACCTG 555372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471713449127251