Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq4739 178 2e-38
seq5402 176 6e-38
seq5267 147 3e-29
seq5396 113 6e-19
seq4734 98.7 1e-14
>seq4739
Length=5756469
Score = 178 bits (196), Expect = 2e-38
Identities = 156/192 (81%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 1592106 AGAAGCGCACCGACGACATC-TCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCC 1592164
|||||||||||||||||||| || || |||||| || || | | ||||| ||| |
Sbjct 965259 AGAAGCGCACCGACGACATCATCTCC-TGGGACGCCGACTTCCTCAAGGTCGATCAGGGC 965201
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
||||| || ||| | ||||| ||||||||||| || ||||||||| ||||| || ||
Sbjct 965200 ACCCTGTTCGAGCTCATCCTGGCCGCCAACTATCTGGACATCAAGGGCCTGCTGGAGCTC 965141
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| | |||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 965140 ACCTGCAAGACGGTGGCCAACATGATCAAGGGCAAGACACCCGAGGAGATCCGCAAGACC 965081
Query 1592285 TTTAACATCAAG 1592296
|| |||||||||
Sbjct 965080 TTCAACATCAAG 965069
Score = 93.3 bits (102), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 507077 TCGGGCAAGCCCACCAAGGGCCTCGTGGAGCGGTTCAAGGGCAAGGAGGGTAGGATCCGC 507136
|||||||||||| || | | || || ||| ||||||| |||||||| ||||| ||
Sbjct 556791 TCGGGCAAGCCCCTTAAAGCCATCAAGGCGCGTCTCAAGGGTAAGGAGGGCAGGATTCGT 556732
Query 507137 GGCAATTGCATGGGCAAGCGCGTCAACTTTACCGCGCGCGCCGTCATCAGCCCCGACCCC 507196
||||| | ||||| || || || ||||| |||| || | ||||||| |||||| |||
Sbjct 556731 GGCAACTTGATGGGAAAACGTGTGGACTTTTCCGCCCGTACTGTCATCACCCCCGATCCC 556672
Query 507197 GAGATCGACATTGACGAGGTGGGCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTCCC 507256
| | || ||| |||| || ||||| |||| | ||| || ||||| |||
Sbjct 556671 AACCTGCGTATCGACCAGGTCGGTGTGCCGCGCTCCATCGCCCAGAACCTGACCTTCCCC 556612
Query 507257 GAGCGCGTGACGCCCCTT 507274
|||| || || ||||||
Sbjct 556611 GAGCTGGTCAC-CCCCTT 556595
Score = 89.7 bits (98), Expect = 6e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 507735 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGG 507794
||||||||||||| || ||||||||||||||||| ||||||||||| |||||| | |
Sbjct 556313 CCTACAACGCCGATTTCGACGGCGACGAGATGAATCTGCACGTGCCGCAGTCCATGGAGA 556254
Query 507795 CGCGCGCCGAGGTG 507808
|||| |||||||||
Sbjct 556253 CGCGTGCCGAGGTG 556240
>seq5402
Length=10656099
Score = 176 bits (194), Expect = 6e-38
Identities = 379/558 (68%), Gaps = 14/558 (3%)
Strand=Plus/Minus
Query 1852106 GGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGCGCAAAG 1852165
||||| | | ||||| ||||||| ||||| | |||||||| | || |||
Sbjct 3696281 GGGTTCATGAAGTGGATGCGCTTCTCGTAGCCCAACTGCGGCAGGTACTTCTCCGAGAAG 3696222
Query 1852166 GCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 1852225
| || |||||||||||||| || || ||||||||||| || | ||||| || ||||
Sbjct 3696221 GTGAAGATCTTGCGCTGGTCCACGCCACCGAACTGGGCGTCCACCTTGAGGTACTCCTCG 3696162
Query 1852226 TCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTTGCGGTCCATCT-- 1852283
|| |||||||||| | ||||| |||| | || || |||| |||| ||
Sbjct 3696161 TCCAGGGCCTGCAGGCCGGGGTACAGCAAGCCAGAAAGCAGGGGGTAC---TCCACCTGT 3696105
Query 1852284 -TGACCACCTGAGCGGCGGCCTTTTGCGC--CGTGCCGGTGCGC-ACGTGCGCCGCGAGT 1852339
||||||||| ||| | ||||| | || ||||| || | | ||| | || |||
Sbjct 3696104 TTGACCACCTCGGCGCCCGCCTTCTTGGCATCGTGCTGGGTCACGACG-GAGCTT--AGT 3696048
Query 1852340 CGGTAGAGGTCGAGCGCGTAGGCGCCGCCGCACTGGTACTCGGTGCCGCGCACAAACTCG 1852399
||||| || || | ||| | | ||||||| ||| |||| || ||||
Sbjct 3696047 TTGTAGACATCCAGGGTGTATTCCTTGGACAACTGGTAGTCGCTGCCCTTGACGAACTTC 3695988
Query 1852400 AGTCCGCCCAGCGGCACGCCGATGT-GCTGGAGCATGGCCTTGATGGCAAACTCGTACCA 1852458
|| | ||||||||||||| ||| ||| ||||||||||||||| | |||||| |
Sbjct 3695987 AGCTTGTCCAGCGGCACGCCAATGGAGCTC-AGCATGGCCTTGATGACCTGCTCGTAGTA 3695929
Query 1852459 GCGGCACCGGTGTTCGACCAGGTCCCACGGCGTCTTGCCGTTGTCGAGGTGGGCGTGCAC 1852518
|| || | || | |||| ||| |||| ||| |||||| |||| ||| || |
Sbjct 3695928 CTGGGTGCGCAGCTCCAGCAGGGACCAGGGCGCCTTCATGTTGTCCAGGTAGGCATGGAG 3695869
Query 1852519 GTCGGCAAAGAGGATCTTGACCCGACAGCCGGCCTGGAGAAAGTCGGCCAGTTTGAAGAT 1852578
||||| || ||||| | ||| ||||| |||| || |||||||| | || | ||
Sbjct 3695868 ATCGGCGAACAGGATGGTCACCTCGCAGCCTGCCTTCAGGAAGTCGGCAATCTTCGACAT 3695809
Query 1852579 GGGCACAAAGTAGCCTAGGTGCGGGTTGCCCGTCGGCGCCGTGCCCCAATATATGATCAG 1852638
|||||| |||||| | | || || |||||||||| |||||| ||||| || || ||||
Sbjct 3695808 GGGCACGAAGTAGGCGACATGTGGCTTGCCCGTCGTCGCCGTTCCCCAGTAGATCTTCAG 3695749
Query 1852639 GGGGCGCTCGGCCATGAT 1852656
||||| |||| |||
Sbjct 3695748 ATCCCGCTCCGCCAGGAT 3695731
Score = 132 bits (146), Expect = 6e-25
Identities = 242/349 (69%), Gaps = 8/349 (2%)
Strand=Plus/Minus
Query 1573895 GGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGG 1573954
|||||| || ||| |||||||||||| | |||| || ||||| | ||||| ||||
Sbjct 835738 GGGTCCTCCTGGCGTGGGCAAGACCACCACCATCCAATGCCTGGCCAGGATCCTCCTGGG 835679
Query 1573955 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGT 1574014
| | ||||| || ||||| | ||||| || | ||||| || |||| ||
Sbjct 835678 AGACAGTTATAAGGAGGCTGTCCTCGAGTTAAACGCCTCCAATGAGCGAGGAATCGATGT 835619
Query 1574015 CGTGCGCAAGATCATCAAGCACCACGCCTC-CAAGAGGATCGAC-CTGCCGCCCGGACGC 1574072
|||||||| | |||||| ||| ||| ||| ||| ||||| | ||| |
Sbjct 835618 GGTGCGCAACAAGATCAAGATGTTTGCCCAGCAAAAGGT--GACACTGCCCCGTGGAAGG 835561
Query 1574073 CACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTG 1574132
|||||| | | |||||||||||||| ||| || | ||| || |||||||||||| ||
Sbjct 835560 CACAAGATTGTGATCCTCGACGAGGCGGACAGCATGACGGAGGGAGCCCAGCAGGCCTTG 835501
Query 1574133 CGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCG 1574192
|| ||||||||| | ||| || ||| ||| | || ||| |||| ||||||||
Sbjct 835500 CGCCGCACCATGGAGATCTACAGCAGCACCACGAGATTCGCCTTGGCCTGCAACACCAGC 835441
Query 1574193 TCGATGGTCATCGAGGCCCTCCAAAGTCGC--TGCGCCATTCTGCGCTT 1574239
|| | |||||||| || ||| |||||| || ||||| ||||| ||
Sbjct 835440 GAGAAGATCATCGAGCCCATCC--AGTCGCGATGTGCCATGCTGCGATT 835394
>seq5267
Length=4296760
Score = 147 bits (162), Expect = 3e-29
Identities = 175/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690
||||||| | |||||| ||||||||||||||||| || ||| | |||| | | |
Sbjct 669047 CCGAGTGCACGTTCTCCATGGCGATCTGGAAGCCATAGAAGCAGCGAGCCTCCGTGATCT 669106
Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750
| ||||||| |||| || || ||||||||||| |||||||| ||| ||||||||
Sbjct 669107 GCACCTCCTGGCTGAAGCGCTCGACCAGGTTCTCGTTAACGATGCCATCGGAGGCGGCGA 669166
Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGT-GG 869809
| || ||||| |||||| ||| ||||||||||||||||| | || ||||| ||
Sbjct 669167 AGAAGGCCAGCACGTGCGAGATGAAGTGGCGCTCGTCGTCCTTCAGGCGGTGCCAGTCGG 669226
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCT 869864
| | ||| | ||| ||||||||||| ||||||||| |||||||| ||||
Sbjct 669227 TCAG-GTCCTTGGAGAGATCCACCTCCTCCACGGTCCAGAAAGAGGCCTCAGCCT 669280
Score = 145 bits (160), Expect = 9e-29
Identities = 146/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
||||||||||||| ||||||||| | |||||| || ||| | | || || ||| ||
Sbjct 842774 AGAAGCGCACCGATGACATCTCGTCCTGGGACGCAGACTTTCTCAAGGTGGACCAGGGCA 842715
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
|||| || ||| |||||||||| || ||||| || ||||| || ||||| || |
Sbjct 842714 CCCTGTTCGAGCTGATCCTCGCTGCGAACTATCTGAACATCCAGGGCCTGCTGGACGTCA 842655
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
|||||| | ||||||||||||||||||||||||||||| |||| |||||| | ||||
Sbjct 842654 CCTGCAAGACGGTGGCCAACATGATCAAGGGCAAGTCGCCGCAGGACATCCGCGACACCT 842595
Query 1592286 TTAACATCAA 1592295
| ||||||
Sbjct 842594 TCGCCATCAA 842585
Score = 120 bits (132), Expect = 4e-21
Identities = 168/236 (71%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
|||||||||||| | |||||| |||||||||||||| || |||||||||| ||||||
Sbjct 668460 GTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCAT 668519
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818
| ||| ||||| || |||||| ||| | || ||| | | ||||| ||
Sbjct 668520 GAAGTTGAAGGGGTTCTTGGTATTGTAGATCTTGCCAACGCCCAGCTCCACCAGCAGACG 668579
Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878
|| || || || ||||||||||| |||||||| || |||||||||||||| ||
Sbjct 668580 ATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATGCCGATGAGGTTTAC 668639
Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCT 868934
|||| | ||| | | ||||| | ||| || | || || ||| ||||||||
Sbjct 668640 GGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCGCGGATGATCT 668695
Score = 116 bits (128), Expect = 5e-20
Identities = 189/272 (69%), Gaps = 9/272 (3%)
Strand=Plus/Plus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| |||||||| ||| | |||||| |||| || || ||||| || |||||||||
Sbjct 668767 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGTCCCGGCATCAGACCGCGCTTC 668826
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
|| ||||| || |||| | ||| ||||| ||| ||||||||||||||||||||||||
Sbjct 668827 TTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAAGAAGATGCCCTCGACGGCGGCAAAG 668886
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTT---GTTGATCCACTTCATCGCC 869356
| |||| ||||| | ||| | | || |||| | |||||| | |||
Sbjct 668887 GCAATGATGCGCTCCCCGAAGTT------GGCCGCCTTGGAGGAGATCCAGGAAAGGGCC 668940
Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTT 869416
||||| ||||| | |||| | |||| || ||||||||| || |||| ||
Sbjct 668941 CAGTCCGCCTTGCGCTTCACAGCGGGCATTGTCTCGATGGCGTTGAACAGGTATTCGCGC 669000
Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAG 869448
| | ||| ||| || ||||||||||||||
Sbjct 669001 TGGTGCGGATCCCGGATGTAGGTGTCGATCAG 669032
>seq5396
Length=9561034
Score = 113 bits (124), Expect = 6e-19
Identities = 142/195 (73%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 1628406 CGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACGT 1628465
|||||| | || ||||| || ||| || | | |||| ||||||||| || |
Sbjct 8234961 CGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTAT 8235020
Query 1628466 CCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAG 1628525
|||||| ||||| || || ||||| || || ||||||||||||||| |||||| || ||
Sbjct 8235021 CCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCCGGTGTTCTTCTTAAG 8235080
Query 1628526 GTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 1628585
|| || | || | | ||| | |||||| ||||||||||| ||||||||| ||
Sbjct 8235081 TTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGG 8235140
Query 1628586 GCGCTTGCCGCCGCC 1628600
||||||||||| ||
Sbjct 8235141 ACGCTTGCCGCCTCC 8235155
Score = 96.9 bits (106), Expect = 4e-14
Identities = 183/266 (69%), Gaps = 4/266 (2%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||| ||||| ||||||||| | ||| ||||| | | |||||| || ||||| |||||
Sbjct 8235156 CTGATCGACATAGCGCGCCACATTGTTGAAGACCCTCAACATGGGAACCAGGCCATTGGA 8235215
Query 1630125 CTCGCCGTTGGTGCCCGCCA--CGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAG 1630182
|||||| ||||| || | || ||| ||| || || | || || ||
Sbjct 8235216 AGTGCCGTTCGTGCC-GCAAATCG-AGGTGCCCTTTGCTCGGATGCAATGGACGTTAAGT 8235273
Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242
|| ||||||||||||||||| ||||| | |||||||| | | | | | ||||||
Sbjct 8235274 CCAATGCCGCCGGCCGACTTCGAGATCATGGCGCACTGCTCCACGGACTTAAAAATGCCC 8235333
Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302
||||| |||||||| ||||| || ||| || || ||||| |||||| | |||
Sbjct 8235334 TCGATGGAGTCGGCTGTCATGGTCAAGAGGAAACAAGACGACAGCTGCGGGCGATTTGTG 8235393
Query 1630303 CCGGCGTTGAAGAGCGTGGGCGTCGC 1630328
| ||| || ||||| |||| |||
Sbjct 8235394 GCAGCGGCAAAAAGCGTTGGCGACGC 8235419
>seq4734
Length=6139107
Score = 98.7 bits (108), Expect = 1e-14
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 1592156 GAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTG 1592215
|| ||| ||| ||||| ||| | ||||| || ||||||||| | || |||| | ||||
Sbjct 3782485 GACCAGGGCACTCTCTTCGAGCTCATCCTGGCGGCCAACTACTTGGATATCAGGAATCTG 3782426
Query 1592216 CTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATC 1592275
||| || | |||| | | |||||||| |||||||||||| | || | |||||||||
Sbjct 3782425 CTCAATGCCGCCTGCATGACGGTGGCCAATATGATCAAGGGCCACACGGCGGAGGAGATC 3782366
Query 1592276 CGCAAGACCTTTAACAT 1592292
||| ||||||| ||||
Sbjct 3782365 CGCCAGACCTTCCACAT 3782349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106685956755791
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