Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 307 1e-78
seq5402 122 8e-23
seq5395 116 3e-21
seq5238 109 5e-19
>seq5396
Length=9561034
Score = 307 bits (340), Expect = 1e-78
Identities = 1143/1780 (64%), Gaps = 31/1780 (2%)
Strand=Plus/Plus
Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213
||||| || || |||| ||||| | || ||||| || || | ||| || ||||||||
Sbjct 8233759 TTATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATTCCA 8233818
Query 138214 GTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGT 138273
||||| | ||| || ||||| || | |||||| || |||||| | || | ||
Sbjct 8233819 GTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTGGC 8233878
Query 138274 TTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCC 138333
| |||| | ||||| ||||| ||||||||||| ||||| || |||||||| ||||
Sbjct 8233879 TCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGGCC 8233938
Query 138334 ATGTTAAT--TAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391
|| ||||| | | || || | || |||||||| || ||||| ||||| || | |
Sbjct 8233939 ATCTTAATGGTCGA-CTTCAC-TGAGATTTCCCACACTGTTTTGTACAGATCGCGGACCT 8233996
Query 138392 GTCGCGGTATTGTTGCAATATTTTGAAT---GCTCCCGTTGGCCGCAATGATGCGATTTC 138448
| || || | ||||||| || || || || | || | |||||| | ||
Sbjct 8233997 TCTGGGGGATGGCCTCAATATTCTGGATTGAGCCCCTGCTG---GAAATGATTTGGTTCT 8234053
Query 138449 TCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGA 138508
||||||| |||| ||| | || || | | ||| ||| || || ||| | |
Sbjct 8234054 TCATGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACCA 8234113
Query 138509 CCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACG 138568
| || ||||| || | || ||||| | ||||| || | ||| | ||||| || |
Sbjct 8234114 CTTGGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAAAG 8234173
Query 138569 ATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAG 138628
|||||||||| |||| ||| || || |||| ||| || ||||| ||| ||||| || |
Sbjct 8234174 ATTCGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAGGG 8234233
Query 138629 AATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC 138688
| ||||| | |||||| ||||||| ||||| || | ||||||||| | |
Sbjct 8234234 AGTTCCGGACACCGTGCTGCTTGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTTTG 8234293
Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGT 138748
| || ||||| |||||| |||||||| | || || || ||||||| || || |
Sbjct 8234294 TCGGCACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCTCACGGGACTTCCCTCAT 8234353
Query 138749 ACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGT 138808
| | || ||| || || |||| || || || || || || || ||||
Sbjct 8234354 AGGTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCGTAGT 8234413
Query 138809 AAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGC 138868
| || |||||| ||||||||||| | | | ||| || | || || || || | |
Sbjct 8234414 AGATGGTTTCGAATATCTGCTGATTCAAGAGACCGGCTTCTTCACTTTCATAGGGGAAAC 8234473
Query 138869 GGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCA 138928
| | | | | ||||| || | || || || || | || || || ||||| | ||
Sbjct 8234474 GCATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGATGCCTCA 8234533
Query 138929 GATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAAT 138988
|| || ||||| || | || || |||||| ||||||||| ||||| | ||
Sbjct 8234534 AGTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTGTTAAGAT 8234593
Query 138989 --TTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTT 139046
|| | | ||| ||| || | ||| | | | ||||||||||| ||
Sbjct 8234594 TCTTGGTA--ACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGT------CTT 8234645
Query 139047 GTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCAC 139106
||| | || ||| || |||||| || || || | |||||| || || |
Sbjct 8234646 CTCG-----GGAGT-GACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAAT 8234699
Query 139107 TTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACC 139166
||||| || | ||| || || ||||| | ||||| || || |||||||| || ||
Sbjct 8234700 CTCGTCCGGAGAGGAGTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCC 8234759
Query 139167 TAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCC 139226
| ||| || || ||||| || | ||| || ||||| || | ||||| || || | ||
Sbjct 8234760 GACATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCC 8234819
Query 139227 AGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCAC 139286
|||||| || |||| ||| |||||| ||||| ||| | | ||
Sbjct 8234820 AGTTTCGACCTGTGCCTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTT 8234879
Query 139287 GTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTC 139346
| | | | || |||| ||||| || || | | |||||| || || | | ||
Sbjct 8234880 GGCACGACCCTCTTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATC 8234939
Query 139347 AGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCG 139406
||| | | || || | |||||||| || ||||| | || || |||| ||||||
Sbjct 8234940 GTGAAGGCCAGGGCATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCG 8234999
Query 139407 CCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTC 139466
| |||| || ||||| || ||||||| ||| | | || |||||| || || || ||
Sbjct 8235000 CTTCATAAAGAGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTC 8235059
Query 139467 CGAACCCATGTTACGTTTCATGTT-AAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCA 139525
| || |||| | | | | ||| ||||| ||||| ||||| | |||||| || ||||
Sbjct 8235060 CTTGCCGGTGTT-CTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCA 8235118
Query 139526 GATAGATGGCCATTGCGCCTTTCCGTTTGCCACCT---TGATCGACGTGTCGTACAGCAT 139582
| || ||||| | || || || ||||| ||| |||||||| | || | |||
Sbjct 8235119 GGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACAT 8235178
Query 139583 TATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGG 139642
| ||||| || | |||||| || |||| || | | || ||||| |||| | || |
Sbjct 8235179 TGTTGAAGACCCTCAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCG 8235238
Query 139643 GACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATA 139702
|| ||||||| | ||| || || | || || |||||| | | || || |
Sbjct 8235239 AGGTGCCCTTTGCTCGGATGCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGA 8235298
Query 139703 TTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGA 139762
| | |||| | | | || | || || ||| |||| | ||| || |
Sbjct 8235299 TCATGGCGCACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCA 8235358
Query 139763 CCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCG 139822
|| || || ||||| || ||||| | || ||| | || ||||| || || || ||
Sbjct 8235359 AGAGGAAACAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGACG 8235418
Query 139823 CGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCC 139882
| || ||||| | | | ||||| | | || ||||| | ||| | ||||||
Sbjct 8235419 CATGAGTGAAGTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTATATCCT 8235478
Query 139883 TTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922
||| ||||| |||| | || ||||||| |||||||||
Sbjct 8235479 CTCCATGGATTCCGATCGCCACGCGCATCAACATATGTTG 8235518
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| |||| || || || || || || || ||||| || || ||| | |
Sbjct 8330850 GATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACGCTTGAGGTCGAACCTTC 8330909
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | |||| || ||| ||||| || |||||||||||||| ||||| |||||
Sbjct 8330910 GGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCA 8330969
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| ||||||| || || || |||||||| ||| | | | | || || |||||
Sbjct 8330970 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAA 8331029
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| ||||| || || | ||||||||| |||| |||| || ||
Sbjct 8331030 CATTCAGAAGGAGTCCACTTTGCACTTGGTGCTGCGTCTGCGTGGTGG 8331077
>seq5402
Length=10656099
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || ||||| || ||||| | || || || || ||
Sbjct 571865 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAGCCCTCC 571806
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 571805 GACACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAG 571746
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| ||||| || || |||||||| | | | |||| || || |||
Sbjct 571745 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAGGACGGACGTACCCTGTCCGACTACAAC 571686
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || |||||||| | || ||||||| ||
Sbjct 571685 ATCCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTGCGCGGTGG 571639
Score = 104 bits (114), Expect = 2e-17
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762
|||||||||||| | || || | ||||| || || || || || || || | ||||| |
Sbjct 571637 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACCCTGGAGGT-GGAGCCATC 571579
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||| ||||| || ||||| || || |||||
Sbjct 571578 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCA 571519
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTA 24879
|| ||| ||||||| ||||| || ||||| ||||| || || || | || |||||
Sbjct 571518 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGA--CG-GACGCACTCTTTCTGATTA 571462
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || ||||| ||||| | || ||||| | || |||| || ||
Sbjct 571461 CAACATCCAGAAGGAGTCGACCTTGCATTTGGTTCTCCGTCTGCGAGGTGG 571411
>seq5395
Length=2659632
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || || || ||
Sbjct 975757 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCTCC 975698
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||| ||||| || ||||| || || || ||
Sbjct 975697 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 975638
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| ||||| || ||||||||||| | | | |||| || || |||
Sbjct 975637 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAAC 975578
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
|| || ||||| || || || ||||||||| | || |||| || ||||
Sbjct 975577 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGTCTGCGTGGTGGCG 975529
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | || || || || || || || || || || || || || || ||
Sbjct 975985 ATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCTCC 975926
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || ||||| || || || ||
Sbjct 975925 GACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAG 975866
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| ||||||| ||||| || ||||||||||| | | | |||| ||||| |||
Sbjct 975865 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGATTACAAC 975806
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||||||||| | || | || || |||
Sbjct 975805 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGCCTCCGTGGTGGC 975758
>seq5238
Length=3592495
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||| ||||| | ||||| || ||||| || || || || | || || || |
Sbjct 2679231 ACCATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCT 2679290
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || |||||||| ||||| || || || || || |||
Sbjct 2679291 TCGGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGAT 2679350
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || ||| ||||||| ||||| || ||||||||||| | | | |||| || ||
Sbjct 2679351 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCCGACTAC 2679410
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || ||||| ||||| || ||| ||||| | || | ||||| ||
Sbjct 2679411 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTACGCGGTGG 2679460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449866540194440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |