Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq5104 190 2e-43
>seq5104
Length=4047290
Score = 190 bits (210), Expect = 2e-43
Identities = 171/213 (80%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496
||||| | ||||||| ||||||| |||||| || |||||||| || || || |||||||
Sbjct 1136263 ATCGAACAGCGTTTGGGCGCCCAACTCGCAGCCAAAGTACTTAGTGGGATAGGTGGCCGG 1136204
Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556
|||||||| ||| |||| | ||||| ||||||||| | || ||||||||||| || ||
Sbjct 1136203 ACGTCCAATGGCCCTGGCCACTTCGGCCATGTTGACCAGAACGGTCTTGATGCCATTTCC 1136144
Query 34557 CTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614
||| || || |||||||| ||||| |||||||| |||||||| ||||| ||||| |
Sbjct 1136143 CTTGCCCTCCACCTTGGCCTGCAGA--CGCGGCATCTTGTAGCGATAGAAGATGTCCGTC 1136086
Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647
||| ||||||||||||| || || ||||| ||
Sbjct 1136085 ACACTGCGGTTAACGTTTACGGTGGCCATCTTG 1136053
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263
|| ||||| |||| ||||| ||||| | ||| || || | ||| ||||| |
Sbjct 1137092 GGAGGGTTCTTCACAATGAACGTGTTCACCTTGTGGTTGACCTTCAGCAGACCGTGGAAG 1137033
Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323
|||||||| ||||| ||| | || | | || || |||||||| | | | |||
Sbjct 1137032 CCGCATGCCTTGCATGACTGCGAAATGGTCTGGTTCTTGGCGGACACAGTCAAATTGGTC 1136973
Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383
||||| ||||| || || || || | |||||||||||| || ||||| || |||| ||||
Sbjct 1136972 TCCGGATTGTCGCACTCGGGGCAAAGCACAAACTTGCGAATAAAACCGTCCAGCAAGTCC 1136913
Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
|| | ||| ||||| || || ||||||| || ||||| ||
Sbjct 1136912 TGCAGCTTGTTCACATCGTGCGAACCATTGACGACAAAGCGTTCATT 1136866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412813810986839
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |