Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq5104 190 2e-43 >seq5104 Length=4047290 Score = 190 bits (210), Expect = 2e-43 Identities = 171/213 (80%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 ||||| | ||||||| ||||||| |||||| || |||||||| || || || ||||||| Sbjct 1136263 ATCGAACAGCGTTTGGGCGCCCAACTCGCAGCCAAAGTACTTAGTGGGATAGGTGGCCGG 1136204 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 |||||||| ||| |||| | ||||| ||||||||| | || ||||||||||| || || Sbjct 1136203 ACGTCCAATGGCCCTGGCCACTTCGGCCATGTTGACCAGAACGGTCTTGATGCCATTTCC 1136144 Query 34557 CTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614 ||| || || |||||||| ||||| |||||||| |||||||| ||||| ||||| | Sbjct 1136143 CTTGCCCTCCACCTTGGCCTGCAGA--CGCGGCATCTTGTAGCGATAGAAGATGTCCGTC 1136086 Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCATCGTG 34647 ||| ||||||||||||| || || ||||| || Sbjct 1136085 ACACTGCGGTTAACGTTTACGGTGGCCATCTTG 1136053 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 || ||||| |||| ||||| ||||| | ||| || || | ||| ||||| | Sbjct 1137092 GGAGGGTTCTTCACAATGAACGTGTTCACCTTGTGGTTGACCTTCAGCAGACCGTGGAAG 1137033 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 |||||||| ||||| ||| | || | | || || |||||||| | | | ||| Sbjct 1137032 CCGCATGCCTTGCATGACTGCGAAATGGTCTGGTTCTTGGCGGACACAGTCAAATTGGTC 1136973 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 ||||| ||||| || || || || | |||||||||||| || ||||| || |||| |||| Sbjct 1136972 TCCGGATTGTCGCACTCGGGGCAAAGCACAAACTTGCGAATAAAACCGTCCAGCAAGTCC 1136913 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || | ||| ||||| || || ||||||| || ||||| || Sbjct 1136912 TGCAGCTTGTTCACATCGTGCGAACCATTGACGACAAAGCGTTCATT 1136866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412813810986839