Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5402 181 2e-39 seq4739 156 7e-32 seq5267 150 3e-30 seq4614 141 1e-27 seq5396 114 2e-19 >seq5402 Length=10656099 Score = 181 bits (200), Expect = 2e-39 Identities = 378/557 (68%), Gaps = 12/557 (2%) Strand=Plus/Minus Query 2411449 GGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCAAAG 2411508 ||||| | | |||||||||||| |||||||| | |||||||| | || ||| Sbjct 3696281 GGGTTCATGAAGTGGATGCGCTTCTCGTAGCCCAACTGCGGCAGGTACTTCTCCGAGAAG 3696222 Query 2411509 GCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCG 2411568 | ||||||||||||||||| || || ||||||||||| || | ||||| || |||| Sbjct 3696221 GTGAAGATCTTGCGCTGGTCCACGCCACCGAACTGGGCGTCCACCTTGAGGTACTCCTCG 3696162 Query 2411569 TCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCATCT-- 2411626 || |||||||||| | ||||| | | | ||| | |||| |||| || Sbjct 3696161 TCCAGGGCCTGCAGGCCGGGGTACAGCAAGCCAGAAAGCAGGGGGTAC---TCCACCTGT 3696105 Query 2411627 -TGACCACCTGGGCGGCGGCCTTTTGCGC--CGTGCCGACGGTCACGCGCGCCGTCAGGC 2411683 ||||||||| |||| | ||||| | || ||||| | ||||||| | | || Sbjct 3696104 TTGACCACCTCGGCGCCCGCCTTCTTGGCATCGTGCTG--GGTCACGACGGAGCTTAGTT 3696047 Query 2411684 GCAAGAGGTCGAGCGTGTAGGCGGCGCCATGCTGGTAATCGCTGCCGCGCACAAATTCGA 2411743 ||| || || ||||| | | |||||| |||||||| || || | | Sbjct 3696046 TGTAGACATCCAGGGTGTATTCCTTGGACAACTGGTAGTCGCTGCCCTTGACGAACTTCA 3695987 Query 2411744 GACGATCCAGCGGGACGCCAATGT-GCTGGAGCATGGCCTTGATGGCAAACTCGTACCAG 2411802 | |||||||| ||||||||| ||| ||||||||||||||| | |||||| | Sbjct 3695986 GCTTGTCCAGCGGCACGCCAATGGAGCTC-AGCATGGCCTTGATGACCTGCTCGTAGTAC 3695928 Query 2411803 CGGCACCGGTGCTCGACGAGGTCCCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACG 2411862 || || |||| | ||| ||| |||| ||| ||||| |||| ||| || | Sbjct 3695927 TGGGTGCGCAGCTCCAGCAGGGACCAGGGCGCCTTCATGTTGTCCAGGTAGGCATGGAGA 3695868 Query 2411863 TCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATG 2411922 ||||| || ||||| ||||| || || |||| || |||||||| | || | ||| Sbjct 3695867 TCGGCGAACAGGATGGTCACCTCGCAGCCTGCCTTCAGGAAGTCGGCAATCTTCGACATG 3695808 Query 2411923 GGCACAAAGTAGCCCAGATGGGGCTTGCCCGTCGGCGCGGTGCCCCAATAAATGCAGAGA 2411982 ||||| |||||| | | ||| ||||||||||||| ||| || ||||| || || ||| Sbjct 3695807 GGCACGAAGTAGGCGACATGTGGCTTGCCCGTCGTCGCCGTTCCCCAGTAGATCTTCAGA 3695748 Query 2411983 GGGCGCTCGGCCATGAT 2411999 ||||| |||| ||| Sbjct 3695747 TCCCGCTCCGCCAGGAT 3695731 >seq4739 Length=5756469 Score = 156 bits (172), Expect = 7e-32 Identities = 152/193 (79%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATT-TCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACC 2035624 || ||||||||||||||||| || || |||||| | ||| | ||||||| || Sbjct 965260 GAGAAGCGCACCGACGACATCATCTCC-TGGGACGCCGACTTCCTCAAGGTCGATCAGGG 965202 Query 2035625 CACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTT 2035684 |||||| || ||| | ||||| ||||||||||| || ||||||||| ||| || || | Sbjct 965201 CACCCTGTTCGAGCTCATCCTGGCCGCCAACTATCTGGACATCAAGGGCCTGCTGGAGCT 965142 Query 2035685 GGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGAC 2035744 |||||||| ||||||||| | |||||||||||| | |||||||| ||||||||||| Sbjct 965141 CACCTGCAAGACGGTGGCCAACATGATCAAGGGCAAGACACCCGAGGAGATCCGCAAGAC 965082 Query 2035745 CTTTAACATCAAG 2035757 ||| ||||||||| Sbjct 965081 CTTCAACATCAAG 965069 Score = 87.8 bits (96), Expect = 3e-11 Identities = 139/193 (72%), Gaps = 10/193 (5%) Strand=Plus/Minus Query 429528 GTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGGCAGCCGTCGCTCCAC 429587 || ||||| ||| ||||| || ||| | ||| || | ||||| ||||| |||| ||| Sbjct 556449 GTGGAGCGTCACTTGCGCGACGACGATCTGGTGATCTTCAACCGACAGCCCACGCTGCAC 556390 Query 429588 ATGGGGTCGATGCTCAACCACAAGGTG---GTGCCCATGCCC-GGTCGCACCTTCCGGCT 429643 | | | ||| | |||| |||| |||| |||| ||||| || ||||| | Sbjct 556389 AAGATGAGTATGATGGGGCACAGGGTGAAAGTGC---TGCCATGGTCG-ACGTTCCGCAT 556334 Query 429644 CAACCTGGCC-GTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGC 429702 ||||| | || | || ||||||||||||| || ||||||||||||||||| |||| Sbjct 556333 GAACCTCTCTTGTACCTCGC-CCTACAACGCCGATTTCGACGGCGACGAGATGAATCTGC 556275 Query 429703 ACGTGCCCCAGTC 429715 ||||||| ||||| Sbjct 556274 ACGTGCCGCAGTC 556262 Score = 87.8 bits (96), Expect = 3e-11 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 429032 GTCGGGCAAGCCCACCAAGGGCGTCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGATCCG 429091 ||||||||||||| || | | || || ||| ||||||| ||||||||| |||| || Sbjct 556792 GTCGGGCAAGCCCCTTAAAGCCATCAAGGCGCGTCTCAAGGGTAAGGAGGGCAGGATTCG 556733 Query 429092 CGGCAATTGCATGGGCAAGCGCGTCAACTTTACGGCGCGCGCCGTCATCAGTCCCGACCC 429151 ||||| | ||||| || || || ||||| | || || | ||||||| ||||| || Sbjct 556732 TGGCAACTTGATGGGAAAACGTGTGGACTTTTCCGCCCGTACTGTCATCACCCCCGATCC 556673 Query 429152 CGAAATCGACATTGACGAGGTGGGCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTCC 429211 | | | || ||| |||| || ||||| |||| | ||| || ||||| || Sbjct 556672 CAACCTGCGTATCGACCAGGTCGGTGTGCCGCGCTCCATCGCCCAGAACCTGACCTTCCC 556613 Query 429212 CGAGCGCGTGACGCCCTT 429229 ||||| || || ||||| Sbjct 556612 CGAGCTGGTCACCCCCTT 556595 >seq5267 Length=4296760 Score = 150 bits (166), Expect = 3e-30 Identities = 230/327 (70%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | |||||| ||| || || ||||| || ||||||||| Sbjct 668767 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGTCCCGGCATCAGACCGCGCTTC 668826 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || |||| ||| ||||| ||| |||||||||||||||||||||||| Sbjct 668827 TTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAAGAAGATGCCCTCGACGGCGGCAAAG 668886 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || ||||| | || || || ||| | |||||| | ||||| Sbjct 668887 GCAATGATGCGCTCCCCGAAGTTGGCCG---CCTTGGAGGAGATCCAGGAAAGGGCCCAG 668943 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| | |||| | ||||| || ||||||||| || |||| || || | Sbjct 668944 TCCGCCTTGCGCTTCACAGCGGGCATTGTCTCGATGGCGTTGAACAGGTATTCGCGCTGG 669003 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 ||| ||| || |||||||||||| || | ||| |||| ||||| | ||| || Sbjct 669004 TGCGGATCCCGGATGTAGGTGTCGATCAGCACACTGTACATCTCCGAGTGCACGTTCTCC 669063 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||||||||||||||||||| |||||| Sbjct 669064 ATGGCGATCTGGAAGCCATAGAAGCAG 669090 Score = 141 bits (156), Expect = 1e-27 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || ||||||||||| ||||| ||| | |||||| | |||| | |||| ||||| | Sbjct 842775 GAGAAGCGCACCGATGACATCTCGTCCTGGGACGCAGACTTTCTCAAGGTGGACCAGGGC 842716 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 ||||| || ||| |||||||||| || ||||| || ||||| || ||| || || | Sbjct 842715 ACCCTGTTCGAGCTGATCCTCGCTGCGAACTATCTGAACATCCAGGGCCTGCTGGACGTC 842656 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 |||||||| ||||||||| | ||||||||||||||||| ||||||||||| | ||| Sbjct 842655 ACCTGCAAGACGGTGGCCAACATGATCAAGGGCAAGTCGCCGCAGGACATCCGCGACACC 842596 Query 2035746 TTTAACATCAA 2035756 || |||||| Sbjct 842595 TTCGCCATCAA 842585 Score = 122 bits (134), Expect = 1e-21 Identities = 168/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 ||||||||||| | |||||| |||||||||||||| || |||||||||| |||||| Sbjct 668461 TACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCATG 668520 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||| || |||| ||| | || ||| | | ||||| || Sbjct 668521 AAGTTGAAGGGGTTCTTGGTATTGTAGATCTTGCCAACGCCCAGCTCCACCAGCAGACGA 668580 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 || || |||||||| |||||||| |||||||| || |||||||||||||| ||| Sbjct 668581 TCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATGCCGATGAGGTTTACG 668640 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCT 794142 |||| | ||| ||| ||||| | ||| || | || || ||| |||||||| Sbjct 668641 GGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCGCGGATGATCT 668695 Score = 109 bits (120), Expect = 9e-18 Identities = 129/175 (74%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 796162 TGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGTCGCTGGCGGCG 796221 || ||||||| ||||||| || |||||||||| |||||||| ||| ||||||| Sbjct 669106 TGCACCTCCTGGCTGAAGCGCTCGACCAGGTTCTCGTTAACGATGCCATCGGAGGCGGCG 669165 Query 796222 AAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGCGAGACCCAGTGG 796281 || ||||| || |||||| ||| ||||| ||||||||||| | || | ||||| | Sbjct 669166 AAGAAGGCCAGCACGTGCGAGATGAAGTGGCGCTCGTCGTCCTTCAGGCGGTGCCAGTCG 669225 Query 796282 ACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCT 796336 | ||| | ||| || |||||||| ||||||| || |||||||| |||| Sbjct 669226 GTCAGGTCCTTGGAGAGATCCACCTCCTCCACGGTCCAGAAAGAGGCCTCAGCCT 669280 >seq4614 Length=52314 Score = 141 bits (156), Expect = 1e-27 Identities = 177/243 (73%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||| | |||| || ||| ||| Sbjct 2253 TGTACTTGGTGACAGCCTTGGTTCCCTCACTGACGGCGTGCTTCGCCAACTCTCCGGGCA 2312 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||| || || || |||||||| || || ||| || ||||||||| | Sbjct 2313 GAAGTAGGCGAACAGCCGTTTGGATCTCCCGACTGGTGATAGTCGAGCGCTTGTTGTAGT 2372 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || ||||||| | ||||| |||| || || || ||||| ||||| Sbjct 2373 GAGCCAGACGAGAAGCCTCGGCAGCAATGCGTTCGAAGATATCATTCACAAAGCTGTTCA 2432 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || || |||||| ||||||||| |||||||| || ||||||| Sbjct 2433 TGATGCTCATCGCCTTCGACGAAATGCCCGTGTCGGGGTGGACCTGCTTCAGGACCTTGT 2492 Query 1485710 AAA 1485712 ||| Sbjct 2493 AAA 2495 >seq5396 Length=9561034 Score = 114 bits (126), Expect = 2e-19 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 2071852 ACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTC 2071911 ||||| |||||| || ||| |||||||| |||| || |||||||| || || ||| Sbjct 8234995 ACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTC 8235054 Query 2071912 TCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGC 2071971 |||||||||||| |||||| || || || || | || | || ||| | |||||| ||| Sbjct 8235055 TCCTCCTTGCCGGTGTTCTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGC 8235114 Query 2071972 TCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 |||||||| ||||||||| || ||||||||||| || Sbjct 8235115 TCCAGGTAAATGGCAAAGGCACCGGGACGCTTGCCGCCTCC 8235155 Score = 105 bits (116), Expect = 1e-16 Identities = 185/266 (70%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||||||||||||| | ||| ||||| | | |||||| || ||||| ||||| Sbjct 8235156 CTGATCGACATAGCGCGCCACATTGTTGAAGACCCTCAACATGGGAACCAGGCCATTGGA 8235215 Query 2073600 CTCGCCGTTGGTGCCCGCCA--CGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAG 2073657 |||||| ||||| || | || ||| |||| || || | || || || Sbjct 8235216 AGTGCCGTTCGTGCC-GCAAATCG-AGGTGCCCTTTGCTCGGATGCAATGGACGTTAAGT 8235273 Query 2073658 CCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCC 2073717 || ||||||||||||| ||| ||||| | ||||||| | || | || | |||||| Sbjct 8235274 CCAATGCCGCCGGCCGACTTCGAGATCATGGCGCACTGCTCCACGGACTTAAAAATGCCC 8235333 Query 2073718 TCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTG 2073777 ||||| |||||||| ||||| ||| || || || ||||| |||||||| ||| Sbjct 8235334 TCGATGGAGTCGGCTGTCATGGTCAAGAGGAAACAAGACGACAGCTGCGGGCGATTTGTG 8235393 Query 2073778 CCGGCATTGAAGAGCGTGGGCGTCGC 2073803 | || || ||||| |||| ||| Sbjct 8235394 GCAGCGGCAAAAAGCGTTGGCGACGC 8235419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915658893299597