Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq5170 96.9 3e-15 seq5238 82.4 6e-11 >seq5170 Length=6624210 Score = 96.9 bits (106), Expect = 3e-15 Identities = 108/139 (78%), Gaps = 4/139 (3%) Strand=Plus/Plus Query 105081 GGACTGCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCC 105140 || |||||||| || ||||| ||||||||||| || | || ||||||||||| ||| || Sbjct 512307 GGCCTGCACGGATTCCACGTACACGAGTTCGGGGACAACACCAACGGCTGCATGTCGTCC 512366 Query 105141 GGCGAGCACTTCAA-CCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAA-AGGC 105198 || ||||||||| ||||||| || | | ||||| ||||| | || || |||| | | Sbjct 512367 GGACCGCACTTCAATCCCTACG-GCAAGGAGCACGGAGCTCCCGCCGACG-AGAACCGTC 512424 Query 105199 ACGTCGGCGACCTGGGCAA 105217 || | || ||||||||||| Sbjct 512425 ACCTGGGAGACCTGGGCAA 512443 >seq5238 Length=3592495 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || || ||||| | || ||||| ||||| ||| | || |||| || Sbjct 2679234 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCG 2679293 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | || || ||||| || || || ||| | ||| |||||| Sbjct 2679294 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAG 2679353 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||||||||||| | || || | ||||||||| Sbjct 2679354 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCCGACTACAAC 2679413 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || | ||| ||||| Sbjct 2679414 ATCCAGAAGGAGTCGACCCTCCACCTGGTG 2679443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398849950979347