Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq5376 91.5 1e-12 >seq5376 Length=10037194 Score = 91.5 bits (100), Expect = 1e-12 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||||| | || || ||||| || || || | ||| || || | || | || | ||| Sbjct 4049293 CCAATCAGACGCTTGGCATCGAAGATCGTCTGGGTCGGGTTCATCGCCACCTGGTTCTTG 4049234 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 || || || || |||||| | || || || || || | |||||| |||||||| || ||| Sbjct 4049233 GCGGCGTCGCCGATCAGACGCTCCGTATCGGTGAAGGCAACATAGGATGGAGTGGTACGA 4049174 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 ||||| || || || || || || || || || |||| || | || || || || Sbjct 4049173 TTACCCTGGTCGTTGGCGATGATCTCGACCTTGCCATGCTGGAACACGCCCACGCACGAG 4049114 Query 282851 AAAGTTGTTCCTAAATCAATACCAATAGCA 282880 | || || || ||||||||||||| |||| Sbjct 4049113 TAGGTGGTGCCCAAATCAATACCAACAGCA 4049084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740359244040198