Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq5396 87.8 2e-12 seq5402 82.4 7e-11 >seq5396 Length=9561034 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| || || || ||||| |||||||||| |||||||| ||||| || ||||||||| Sbjct 8331005 TCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 8330946 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||| || ||| | | ||| | || || | ||||| || |||| || | Sbjct 8330945 TCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGCGTGATG 8330886 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTTATGTT 137421 |||||||| || | || || ||||| || ||||| ||| |||| Sbjct 8330885 GTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT--CTTGTGTT 8330843 >seq5402 Length=10656099 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || ||||| | ||| | ||| ||||| | || || || || || ||||||||||| Sbjct 571411 CCACCTCGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGGATGTTGTAATCAGAA 571470 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| ||| ||||| || || || || |||||||||| |||||||| || || Sbjct 571471 AGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 571530 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || || || ||||| || || || | | || | ||||| | || || || Sbjct 571531 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCAGATGGCTCCACC 571590 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | |||||||||||||| || || || || || |||||| Sbjct 571591 TCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCATA 571638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488510272143600