Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq5396 163 6e-35 seq4493 86.0 1e-11 >seq5396 Length=9561034 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | || |||||| || ||||||| ||| || || ||||| || ||||| ||||| Sbjct 8331078 ACCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGA 8331019 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || ||||| || || || ||||| ||||| || | || ||||||||||| Sbjct 8331018 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 8330959 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 |||||||| || || |||||||| ||||| |||||||| || ||||| |||||| || Sbjct 8330958 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGAC 8330899 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| || | ||||| || || |||||||| Sbjct 8330898 CTCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 8330851 >seq4493 Length=3184771 Score = 86.0 bits (94), Expect = 1e-11 Identities = 194/289 (67%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 198339 CTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGA 198398 || ||||| | |||| | ||| || | | || || || ||||| | ||| | | Sbjct 604561 CTCTGGAACTCGGCGCAGCTGCAGCTGGTGCGCGAGGGCAAGATGCACGGCTTTCTGCGC 604502 Query 198399 ATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTAT 198458 ||||||||||| || ||||| || || ||||| || || || || || || ||| Sbjct 604501 ATGTACTGGGCCAAGAAGATTCTCGAGTGGACCGCCACCCCTGAGGAGGCGCTGGAATAT 604442 Query 198459 AGTATCTATCTAAACAATAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGG 198517 ||| |||||| | |||||| || ||||| ||| ||||| ||||| || || || Sbjct 604441 GCGATCCTGCTAAACGACAAGTACAGCCTCGACGG-ACGCGATCCCAACGGCTATGTCGG 604383 Query 198518 TTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTTGG 198577 || |||||||| ||| | ||| | || || | ||||| || | | || || || Sbjct 604382 CTGCATGTGGTCCATTGGGGGAGTCCACGACATGGGCTGGAAGGAGCGGGCCATCTTCGG 604323 Query 198578 GAAGATAAGATATATGAATTATGAGGGTTCTAAGAAAAAATTTGATGTT 198626 ||| | |||||||||| || |||| | ||| ||| || |||||| Sbjct 604322 CAAGGTGCGATATATGAACTACCAGGGGTGCAAGCGAAAGTTCGATGTT 604274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981757722532297