Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 163 6e-35
seq4493 86.0 1e-11
>seq5396
Length=9561034
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || | || |||||| || ||||||| ||| || || ||||| || ||||| |||||
Sbjct 8331078 ACCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGA 8331019
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | | || ||||| || || || ||||| ||||| || | || |||||||||||
Sbjct 8331018 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 8330959
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|||||||| || || |||||||| ||||| |||||||| || ||||| |||||| ||
Sbjct 8330958 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGAC 8330899
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || |||||||| || | ||||| || || ||||||||
Sbjct 8330898 CTCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 8330851
>seq4493
Length=3184771
Score = 86.0 bits (94), Expect = 1e-11
Identities = 194/289 (67%), Gaps = 2/289 (1%)
Strand=Plus/Minus
Query 198339 CTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGA 198398
|| ||||| | |||| | ||| || | | || || || ||||| | ||| | |
Sbjct 604561 CTCTGGAACTCGGCGCAGCTGCAGCTGGTGCGCGAGGGCAAGATGCACGGCTTTCTGCGC 604502
Query 198399 ATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTAT 198458
||||||||||| || ||||| || || ||||| || || || || || || |||
Sbjct 604501 ATGTACTGGGCCAAGAAGATTCTCGAGTGGACCGCCACCCCTGAGGAGGCGCTGGAATAT 604442
Query 198459 AGTATCTATCTAAACAATAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGG 198517
||| |||||| | |||||| || ||||| ||| ||||| ||||| || || ||
Sbjct 604441 GCGATCCTGCTAAACGACAAGTACAGCCTCGACGG-ACGCGATCCCAACGGCTATGTCGG 604383
Query 198518 TTGTATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTTGG 198577
|| |||||||| ||| | ||| | || || | ||||| || | | || || ||
Sbjct 604382 CTGCATGTGGTCCATTGGGGGAGTCCACGACATGGGCTGGAAGGAGCGGGCCATCTTCGG 604323
Query 198578 GAAGATAAGATATATGAATTATGAGGGTTCTAAGAAAAAATTTGATGTT 198626
||| | |||||||||| || |||| | ||| ||| || ||||||
Sbjct 604322 CAAGGTGCGATATATGAACTACCAGGGGTGCAAGCGAAAGTTCGATGTT 604274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981757722532297
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |