Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq5402 109 4e-19
seq5396 105 4e-18
seq5395 102 5e-17
seq5238 87.8 1e-12
>seq5402
Length=10656099
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||||| || ||| | |||||||| | || ||| || || ||||||||||| ||
Sbjct 571411 CCACCTCGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGGATGTTGTAATCAGAA 571470
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| |||||| |||| || | || || ||||| || |||| ||||||||||||| | ||
Sbjct 571471 AGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 571530
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || ||| || | || | |||||| || |||||
Sbjct 571531 ATTCCCTCCTTGTCCTGGATCTTGGCCTTC-ACGTTCTCGATGGTGTCAGATGGCTCCAC 571589
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| || || || || || || || |||||||||||||||
Sbjct 571590 CTCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCATA 571638
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | ||||| || || || ||| || || |||||||| |||||
Sbjct 571638 ACCACCGCGCAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 571697
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| |||| |||| ||| || ||||| || |||| ||||||||||||| | ||
Sbjct 571698 CAGGGTACGTCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 571757
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || ||| |||| || | |||||| | ||||
Sbjct 571758 GATGCCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTCTCAATCGTGTCGGAGGGCTCCA 571816
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || || || ||||| || || || || ||||||||||||||
Sbjct 571817 CCTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 571865
>seq5396
Length=9561034
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | || ||| | |||||| || | |||| ||| || || ||||| || || |
Sbjct 8331079 CACCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAG 8331020
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
|||| ||||| | || |||| || || || || || |||| ||||||||||||| | |
Sbjct 8331019 AGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAG 8330960
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||||||||| ||| || | || |||| || | || || | |||
Sbjct 8330959 GAATTCCTTCTTTGTCCTGAATCTT-GGCTTTGACATTTTCGATAGTATCCGAAGGTTCG 8330901
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| |||| |||||| || || || || | || || || |||||||||||
Sbjct 8330900 ACCTCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 8330851
>seq5395
Length=2659632
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | |||||| || || ||| ||| || || |||||||| |||||
Sbjct 975531 CCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 975590
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| |||||| |||| |||| || |||||||| || |||| ||||||||| ||| | ||
Sbjct 975591 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 975650
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || |||| | | || | ||| ||| | || ||
Sbjct 975651 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTCTCGATGGTATCGGAGGGCTCGAC 975709
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|||| ||||| || || || || | || || || |||||||||||
Sbjct 975710 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 975757
Score = 102 bits (112), Expect = 5e-17
Identities = 155/217 (71%), Gaps = 3/217 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
|||||| || || ||| ||| || || |||||||||||||| || |||||| |||| ||
Sbjct 975776 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTC 975835
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
|| || |||||||| || |||| ||||||||| ||| | || | || || |||||
Sbjct 975836 CAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCCTG 975895
Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|| || | | ||||| || | ||||||| | || || |||| ||||| || |
Sbjct 975896 GATCTT-GGCCTTAACATTCTCGATGGTGTCGGAGGGCTCGACCTCAAGGGTGATGGTCT 975954
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGG 33755
| || || | || || || || || ||||| |||||
Sbjct 975955 TGCCAGTCAGGGTCTTCACGAAAATTTGCAT-GTTGG 975990
>seq5238
Length=3592495
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | || | ||||| || || || ||| || || |||||||| |||||
Sbjct 2679461 ACCACCGCGTAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 2679402
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| |||| |||| || || ||||| || |||| ||||||||||||| | ||
Sbjct 2679401 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 2679342
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| || || ||||| || || ||| |||| || | |||||| | ||||
Sbjct 2679341 GATGCCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTCTCGATGGTGTCCGAAGGCTCCA 2679283
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
| || | ||||| || || || || | ||||| || ||||| ||||| ||
Sbjct 2679282 CCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATGGT 2679231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328681874420160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |