Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq5238 93.3 1e-13
seq5402 84.2 5e-11
seq5396 84.2 5e-11
seq5395 84.2 5e-11
>seq5238
Length=3592495
Score = 93.3 bits (102), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| ||||| || || || ||||| ||||| ||||| ||| ||||| ||||
Sbjct 2679249 AAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCGGACACCATCGAGAAT 2679308
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || || || || | || ||||||
Sbjct 2679309 GTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAGCAGCGTCTGATCTTC 2679368
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| |||| || || | || || |||| |||||| ||||||| |||||
Sbjct 2679369 GCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCG 2679428
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 2679429 ACCCTCCACCTGGT 2679442
>seq5402
Length=10656099
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || | || || || || ||||| |||| ||||| ||||||
Sbjct 571634 CAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCATCTGAC 571575
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || |||||| || || ||
Sbjct 571574 ACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCAGCAG 571515
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || || ||| | ||| | | ||||||||| ||
Sbjct 571514 CGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACTCTTTCTGATTACAACATC 571455
Query 206353 CAGAAAGAGTCTAC 206366
||||| ||||| ||
Sbjct 571454 CAGAAGGAGTCGAC 571441
>seq5396
Length=9561034
Score = 84.2 bits (92), Expect = 5e-11
Identities = 134/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || ||||| || || || ||||| | || || ||| ||| || || |||||
Sbjct 8330866 AAGACCCTCACGGGCAAGACCATCACGCTTGAGGTCGAACCTTCGGATACTATCGAAAAT 8330925
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| || |||||| || |||||||||||| || || || | || |||||
Sbjct 8330926 GTCAAAGCCAA-GATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAGCGTCTGATCTT 8330984
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || |||||| |||||||||| | || | | || || ||| | ||||| |||||
Sbjct 8330985 CGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAACATTCAGAAGGAGTC 8331044
Query 206364 TACTCTTCAC 206373
||| | |||
Sbjct 8331045 CACTTTGCAC 8331054
>seq5395
Length=2659632
Score = 84.2 bits (92), Expect = 5e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| | || || || || ||||| ||||
Sbjct 975970 AAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCTCCGACACCATCGAGAAT 975911
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || ||||| || ||| || | || ||||||
Sbjct 975910 GTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAGCAGCGTCTGATCTTC 975851
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|||||||||||| |||| || ||| | || || ||||||||||| ||||||| |||||
Sbjct 975850 GCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGATTACAACATCCAGAAGGAGTCC 975791
Query 206365 ACTCTTCAC 206373
|| || |||
Sbjct 975790 ACCCTCCAC 975782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181737170297683
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |