Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 347 1e-90
seq5170 158 1e-33
seq5402 89.7 5e-13
seq5395 87.8 2e-12
>seq5396
Length=9561034
Score = 347 bits (384), Expect = 1e-90
Identities = 1200/1844 (65%), Gaps = 36/1844 (2%)
Strand=Plus/Plus
Query 146572 GCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGA 146631
|| || || |||||||||| || ||||| || |||||||| ||| | ||| || |
Sbjct 8233786 GCAGCTGGCTTTGTGCGCAGGTAGTACATTCCAGTTTTGAGACCAGCTTTCCAGGAATAG 8233845
Query 146632 TTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGG 146691
||| || || || | | | || | ||||| ||||| || || ||||| ||
Sbjct 8233846 AAGTGTATGGACGTGAGTTTTCCATAGTTTGGCTCTGCCACATGAATGTTGAACGACTGA 8233905
Query 146692 CTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAATCATGCGTTTTGTCTTC-AT 146750
|| ||||||||||| || || || || ||||||| ||| | || || || ||
Sbjct 8233906 CTCTGATCTATGAACGCTCCTCGATCTGCGGCCATCTTAATGGT-CGACTTCACTGAGAT 8233964
Query 146751 TTCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAAT 146810
|||||| | ||||||||||| | || | | || || | ||||| || || ||
Sbjct 8233965 TTCCCACACTGTTTTGTACAGATCGCGGACCTTCTGGGGGATGGCCTCAATATTCTGGAT 8234024
Query 146811 AGAGCCCTTGTGCGCAAAAATAGTGTTTCGT-ATTTCGGGCGTGTAA-AGGTTTAGTTTA 146868
|||||| || | || || || ||| | || ||| ||| | | || || |
Sbjct 8234025 TGAGCCCCTGCTGGAAATGATT-TGGTTCTTCATGTCGT-CGTCCCACAAGTCCAGCTCC 8234082
Query 146869 ATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTG 146928
| ||||| | |||| || || |||||||| || ||||| | ||| || || |||
Sbjct 8234083 GTTAGGTCCCTTAACAAATGATGGTTAACCACTTGGAATTCGCCAGACAGAACTCGCCTG 8234142
Query 146929 AGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTG 146988
||| | ||| | ||| | ||||| ||||| || || ||||| | |||||||| |||
Sbjct 8234143 GTATAAATATTCGTTGTGTACGGCTCGAAAGATTCGTTGTTGCCCATAATTTGGGCAGTG 8234202
Query 146989 GTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGGATGTTG 147048
| || || ||||| ||| ||||||| || || || | ||||| | ||||
Sbjct 8234203 GACGCAGTGGGCATAGGCGCAACCAACAGGGAGTTCCGGACACCGTGCTGCTTGATGGAC 8234262
Query 147049 TCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGG 147108
||||||| | ||||||||||| | | ||| || |||||||||||||||
Sbjct 8234263 TCCTTCAGTTTCTGCCAGTCCCAAAGGTTTGTCGGCACTTTGTCCCACATGTCGTACTGC 8234322
Query 147109 AGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCC 147168
|| | ||| || ||||||| || | | || || |||||| ||| |||
Sbjct 8234323 AGAATGCCTTTGCTCACGGGACTTCCCTCATAGGTTTCATATGGGCCGTCGATCTGGGCC 8234382
Query 147169 AATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGG 147228
| |||||| || || || || || || ||||| ||||||||| || || | || | |
Sbjct 8234383 AGTTCACAACTGGCTTCCAGGGCGCCGTAGTAGATGGTTTCGAATATCTGCTGATTCAAG 8234442
Query 147229 ACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCC 147288
| |||||||| || || || || | ||||| ||| | | ||| || || || |||
Sbjct 8234443 AGACCGGCTTCTTCACTTTCATAGGGGAAACGCATAAGAATTAGGGCGTCAGCGAATCCC 8234502
Query 147289 TGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTC-GCTATGGG 147347
|||| ||||| ||| | || |||||| | |||| ||| || ||| | | |||
Sbjct 8234503 TGGACACCGATGCCCACGGGACGATGCCTCAAGTTGGATTTCTTTGC-CTCTGGCAGGGG 8234561
Query 147348 ATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTT 147407
||| ||| ||| || |||||||| || || || || || | | ||
Sbjct 8234562 GTAGAAGTTTATATCGATGATCTTGTTAAGATTCTTGGTAACCGTCTTGGTAACTTCCTT 8234621
Query 147408 GAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGA 147467
||||||| |||||| || ||| | ||| | ||| | ||| | |||||| ||
Sbjct 8234622 AAGTTTCTTGAAATCGTATGTC---TTCTCGGGAGTGACGAACATGTTGAGGGCGATGGA 8234678
Query 147468 CGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAG 147527
|||| |||||||| || |||| || | | ||||| ||||||||| | |||||
Sbjct 8234679 TGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAGGAGTACTCCACGATTTCTGTGCACAA 8234738
Query 147528 GTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTT 147587
||||||||| || ||| || | ||| ||||| ||||| |||| ||||| || || ||
Sbjct 8234739 GTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCCTT 8234798
Query 147588 GAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAG 147644
|| |||||||| || || || ||||| || | |||| || |||| ||
Sbjct 8234799 AAACAGCATGTAGGGGTTTCCAGTTTCGACCTGTGCCTCAATAATGGCGAACC---ACAA 8234855
Query 147645 GTCCTGCGCTCGCACCCGCTGCCGATAG--CGGCCCTCGTTTTCGTACCGCTCGTACAAC 147702
| || || | | ||| | | | | | || ||||| | || ||| ||| ||||||
Sbjct 8234856 GGATTGAGC-CTTAACCG-TTCGGTTGGCACGACCCTCTTGCTCATACTTCTCATACAAC 8234913
Query 147703 CGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGC 147762
|| || || ||||| | |||| |||||| || || | |||||||||||| ||
Sbjct 8234914 TTTTCGAATTCATCGCCCCACACATCGTGAAGGCCAGGGCATTTATGCGGACACATTAGT 8234973
Query 147763 GACCACATGT-CGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTA 147821
||||| || | | | || | ||||| |||||| ||||| || | |||||| |||||
Sbjct 8234974 GACCA-ATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCGTA 8235032
Query 147822 CATAAGATCGC--GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATT--AAGCA 147877
| ||||||| |||| | | ||||| ||| |||| | | | || || | | |
Sbjct 8235033 GAACAGATCGCGGGCGCGATTC--TCCTCCTTGCCGGTGTT-CTTCTTAAGTTCCAGGAA 8235089
Query 147878 CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTTC 147937
| | | ||| ||| | ||||||||| || | ||| | ||| | ||||| |||||| |
Sbjct 8235090 CTC-AAAGACGTCCGAGTGCCAGGGCTCCAGGTAAATGGCAAAGGCACCGGGACGCTTGC 8235148
Query 147938 CG---CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGC 147994
|| ||||| ||||||| |||| ||| ||||| || || | || |||||| ||||||
Sbjct 8235149 CGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAAGACCCTCAACATGGGAACCAGGC 8235208
Query 147995 CGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGT 148054
| | | ||||||||| ||| ||| | |||| ||||| | || ||||
Sbjct 8235209 CATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGCCCTTTGCTCGGATGCAATGGACGT 8235268
Query 148055 TAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGA 148114
||| |||||||||||| | |||| || || ||||| | ||| | | | | |
Sbjct 8235269 TAAGTCCAATGCCGCCGGCCGACTTCGAGATCATGGCGCACTGCTCCACGGACTTAAAAA 8235328
Query 148115 TGCCGTCGATGCTGTCGTTTTTGA-CGCCAAGCAAAAAACACGAACACATTTGCGGAATC 148173
|||| |||||| |||| | | | | |||| | ||||| || ||| |||||
Sbjct 8235329 TGCCCTCGATGGAGTCGGCTGTCATGGTCAAG-AGGAAACAAGACGACAGCTGCGGGCGA 8235387
Query 148174 CGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATG 148233
|| | || | ||||| || || ||| || || || || | || | |
Sbjct 8235388 TTTGTGGCAGCGGCAAAAAGCGTTGGCGACGCATGAGTGAAGTATCGCTCCGACAAGAGG 8235447
Query 148234 CGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATG 148293
||| || || | || | || || || || || || || || | ||| ||||||||
Sbjct 8235448 TTATAAGTTTCCACGGCTGCATCTATATCCTCTCCATGGATTCCGATCGCCACGCGCATC 8235507
Query 148294 AGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCG 148353
| ||| || || || || || || | || ||| |||| || ||||| | ||||
Sbjct 8235508 AACATATGTTGCGGACGCTCAGCGATTTTTCCGTTTCTCTTCAGCAGATAGGAACGTTCG 8235567
Query 148354 AGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTA 148397
||||| ||| | ||||| || || || |||| || | |||||
Sbjct 8235568 AGGGTCTTGAACCCAAAATAGTTATACCCAAAGTCGCGGTCGTA 8235611
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| |||| ||||| || | | ||||| || |||||||| ||||| | |||
Sbjct 8331072 ACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGT 8331013
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| ||||| || || | |||| |||||||| ||||||||||| || ||
Sbjct 8331012 GCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCC 8330953
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|||||| || ||| || ||| | | ||| | |||||| | || || || || |
Sbjct 8330952 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAG 8330893
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||| | || || || || || || || | ||| ||||||||
Sbjct 8330892 CGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 8330851
>seq5170
Length=6624210
Score = 158 bits (174), Expect = 1e-33
Identities = 238/338 (70%), Gaps = 3/338 (1%)
Strand=Plus/Minus
Query 51541 CAATACCGATGATGCCGCAGCCGAGACGTCCGCCCGAGTTGCCCGTGGTCTTGCTCAGCG 51600
|||| ||||||| ||||||||| | || | || | ||| ||||||| ||||||||||
Sbjct 512640 CAATGCCGATGACGCCGCAGCCAATGCGGGCACCTGCGTTTCCCGTGGACTTGCTCAGCT 512581
Query 51601 GATGGTCGGTGAGGCCGAGATCGTCGCGCTTTGCGTGAACCACCAGACTGCGGCCAACGA 51660
||| | |||||||||| ||| | ||||| ||||| | |||| || | ||
Sbjct 512580 CGTGGCCACCCTGGCCGAGATCATCGGCATCGGCGTGGACCACAACGGTGCGCCCGATGA 512521
Query 51661 CGCTATTTTCGCCGAAAAGCGTCATCACGTTGTCGATCTTGTCCACTTCGGTGAGGGCGT 51720
||| | ||||||| ||||| ||| |||| | ||| || | |||| | ||
Sbjct 512520 TGCTGTCGGCGCCGAACAGCGTGATCTTCGAGTCGGTGATGTTGACCTTGGTGGGACAGT 512461
Query 51721 TGGACACTTTAGCCTCGACATTGCCCAAGTCGCCGACGTGGCGCATCGCCGCGTTCGGAG 51780
| | | ||||||| ||||||| ||| || | ||| || || | || ||||
Sbjct 512460 CGC---CGGTGGCCTCGATGTTGCCCAGGTCTCCCAGGTGACGGTTCTCGTCGGCGGGAG 512404
Query 51781 CGCCGTGGTCGCTGCCGGTGGGGTTGAAGTGTTCGCCCGCCGACGTGCAGCCGTTGCTGG 51840
| ||||| || ||||| ||| |||||||| || | |||| ||||||||||| ||
Sbjct 512403 CTCCGTGCTCCTTGCCGTAGGGATTGAAGTGCGGTCCGGACGACATGCAGCCGTTGGTGT 512344
Query 51841 TGTCGCCGAATTCGTGCACGTGGAATCCGTGCAGGCCC 51878
|||| ||||| ||||| |||||||||||||||||||||
Sbjct 512343 TGTCCCCGAACTCGTGTACGTGGAATCCGTGCAGGCCC 512306
>seq5402
Length=10656099
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
||||| || | | | ||||| || || |||||||||||| || |||||| || ||
Sbjct 571657 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTCCTCC 571716
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
|| || || |||| |||| |||||||| |||||||| || ||||| || || ||
Sbjct 571717 AGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGG 571776
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || |||| | || | || |||| |||||||| || | || | || |||
Sbjct 571777 ATCTTGGCCTTCACATTCTCAATCGTGTCGGAGGGCTCCACCTCCAAGGTAATGGTCTTA 571836
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| || || | || ||||||||
Sbjct 571837 CCAGTCAAGGTCTTCACAAAGATCTGCAT 571865
>seq5395
Length=2659632
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| || | ||||| || | | | ||||| || || |||||||||||| || |||
Sbjct 975536 ACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGT 975595
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| || || ||||| || |||| |||| |||||||| || ||||| || || ||
Sbjct 975596 GCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATTCC 975655
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || || || |||| | || | ||||||| ||||| || || |
Sbjct 975656 CTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCGACCTCAAG 975715
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | || || |||||||| || || | ||| |||||||||
Sbjct 975716 GGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATG 975758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476578295954280
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