Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5165 345 5e-90 >seq5165 Length=2344106 Score = 345 bits (382), Expect = 5e-90 Identities = 515/727 (71%), Gaps = 18/727 (2%) Strand=Plus/Plus Query 146841 GAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTT 146900 ||| || || ||||||| |||| | | | ||| |||||||||||||| || || | Sbjct 2001961 GAAGTCCTCGATGTCCTGCACCTGGCGCTTGATCACCAGCTTGGGGAAGGGCCGCGGCGT 2002020 Query 146901 CCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAG 146960 | ||||||| | || |||||||||||||| || |||||||||| ||| |||| Sbjct 2002021 GCGCTCCAGCTGCTCCCTTAGCGGCTCCACGTGGTTCAGATAGACGTGCGTGTCGCCCAT 2002080 Query 146961 GGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAG 147020 ||||||||||||||| || ||||| ||||| ||||| ||||| | ||||| ||||||||| Sbjct 2002081 GGTGTGCACAAAGTCGCCGGGCTTCAGGCCCGTCACATGGGCGATCATGTGGGTGAGCAG 2002140 Query 147021 CGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAG 147080 | |||| ||| ||||||||||| || |||||||||||||| | ||| |||||||| Sbjct 2002141 GGCGTAGGAGGCGATGTTGAAGGGCACGCCCAGGCCCATGTCGGCGCTCCTTTGGTACAG 2002200 Query 147081 CTGGCACGAGAGCTCCCCGTCGGCC------ACGTAAAACTGGCACAGGATGTGGCACGG 147134 |||||| |||||||| ||| ||| || || |||||| |||| ||||||||| Sbjct 2002201 CTGGCAGGAGAGCTCACCGCGCGCCTGCGAGACATAGAACTGGGCCAGGCAGTGGCACGG 2002260 Query 147135 CGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCT 147194 ||| || ||||| || | ||| ||| ||||||||||| | | | |||||| Sbjct 2002261 CGGAAGGGCCATCTTTGGTATGTCGAGGGGATTCCAGGCCGACATGATGATGCGCCTGTC 2002320 Query 147195 CTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCC 147254 | ||| ||| |||| ||| ||||| ||| | || |||||| | ||||| ||| | Sbjct 2002321 CGAGGGATTCTTCTTGATCGTGTCGATCACCTGGCGCAACTGGTCGATGCCCTTGCCGCT 2002380 Query 147255 GTAGTTTGTC-CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACA 147313 ||| | ||| ||||| ||||| |||||||||||| | ||||||||||||||| | Sbjct 2002381 GTA-ATCGTCGTCGCAGGTGCCGTACTCGGCCCCAAAGTGACGCCACTGGAAGCCGTAAA 2002439 Query 147314 CTGGCCCCAGGTCGCCG--GGCTTTCTGTGCGAGAAGCCCGCCCGCTTG---AGAAACTC 147368 | || |||||||||||| ||| || | | | | || | ||| || ||||| Sbjct 2002440 CCGGGCCCAGGTCGCCGACGGCGCGCTCCGTGTG-----CCCCAGTTTGTCCAGGAACTC 2002494 Query 147369 GGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGT 147428 || | || ||||||||||| ||| |||||| ||| ||| | |||||| Sbjct 2002495 CCTGGTGCTGTTCTCGTCCCAGATGTGCACGTTCTTGGCCTGCAGCAGCTTGGCGTCCGT 2002554 Query 147429 GGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGT 147488 ||| | |||||||| ||||||||| || || | | ||||| | |||||| Sbjct 2002555 CTTGCCGGCCACGAACCAGATCAGCTCCTCGGCCACGCCGCGGAAGAAGACGCGCTTGGT 2002614 Query 147489 GGTCAGCAGGGGGAACTGGTCCCTCAGCGAATACCTCGCCTGGTCCCCAAACACAGACAG 147548 |||||||||||| || ||| | || | | | |||| | || |||| ||||| Sbjct 2002615 GGTCAGCAGGGGAAAGGAGTCGCGCATGTTGAAGCGCATCTGGGCGCCGAACAGGGACAG 2002674 Query 147549 CGTGCCC 147555 ||||||| Sbjct 2002675 CGTGCCC 2002681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583447717447200