Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 143 3e-29
seq5238 114 1e-20
seq5402 105 7e-18
seq5395 102 8e-17
seq5267 89.7 5e-13
>seq5396
Length=9561034
Score = 143 bits (158), Expect = 3e-29
Identities = 1110/1761 (63%), Gaps = 56/1761 (3%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
||||| ||| || ||||||||||| | || || || || || || || || || ||| ||
Sbjct 8235518 CAACATATGTTGATGCGCGTGGCGATCGGAATCCATGGAGAGGATATAGATGCAGCCGTG 8235459
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
||||| || | | |||| | | | || || || || ||||| || | ||||||
Sbjct 8235458 GAAACTTATAACCTCTTGTCGGAGCGATACTTCACTCATGCGTCGCCAACGCTTTTTGCC 8235399
Query 7684 GCGGGCACAAA-CGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742
|| | |||||| ||| || || |||| || ||||| | | |||||| | |||
Sbjct 8235398 GCTGCCACAAATCGC-CCGCAGCTGTCGTCTTGTTTCCTCTTGACCATGACAGCCGACTC 8235340
Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGG 7802
|||||| ||||||| || | || | ||||||| || || || | | ||||||
Sbjct 8235339 CATCGAGGGCATTTTTAAGTCCGTGGAGCAGTGCGCCATGATCTCGAAGTCGGCCGGCGG 8235280
Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGC-CGCATCGTGTCCACCAACG 7861
|| || || ||||| | | | || || || || | | || | | | ||| ||||
Sbjct 8235279 CATTGGACTTAACGTCCATTGCATCCGAGCAAAGGGCACCTCGATTTGCG-GCACGAACG 8235221
Query 7862 GAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAG 7921
| | ||| || | | ||||||||| | || ||||| || | || ||| |||| |
Sbjct 8235220 GCACTTCCAATGGCCTGGTTCCCATGTTGAGGGTCTTCAACAATGTGGCGCGCTATGTCG 8235161
Query 7922 ACCAG---GGGGGAAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGG 7978
| ||| || || ||||| || ||| |||||| || ||||||| |||||| |||
Sbjct 8235160 ATCAGGGAGGCGGCAAGCGTCCCGGTGCCTTTGCCATTTACCTGGAGCCCTGGCACTCGG 8235101
Query 7979 ACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCG 8038
|| | | | | || | || |||| || || || | || ||||
Sbjct 8235100 ACGTCTTTGAGTTCCTGGAACTTAAGAAGAACACCGGCAAGGAGGAGAATCGCGCCCGCG 8235041
Query 8039 ATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCAC 8098
|||| |||| || ||||| | |||||||| ||||||| |||||| | | | | |
Sbjct 8235040 ATCTGTTCTACGCCCTGTGGATACCCGATCTCTTTATGAAGCGCGTCGAGGCCAATGGAG 8234981
Query 8099 AATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAAT 8158
| ||||| || ||||| || || |||||| | | | || | || |||
Sbjct 8234980 ATTGGTCACTAATGTGTCCGCATAAATGCCCTGGCCTTCACGATGTGTGGGGCGATGAAT 8234921
Query 8159 TTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCA-AGTGAAAGCG 8217
| ||| | ||||| | | || || || || || ||| | | | | || || ||
Sbjct 8234920 TCGAAAAGTTGTATGAGAAGTATGAGCAAGA-GGGTCGTGCCAACCGAACGGTTAAGGCT 8234862
Query 8218 CGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTG 8277
| | || ||||||||| || || |||||| || | || |||||||||
Sbjct 8234861 CAATCCTTGTGGTTCGCCATTATTGAGGCACAGGTCGAAACTGGAAACCCCTACATGCTG 8234802
Query 8278 TACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGC 8337
| || || || |||||| || ||||| || || || |||||||| ||||||
Sbjct 8234801 TTTAAGGATGCCTGCAACAGGAAGAGCAACCAGCAGAATGTCGGCACCATCAAGTGCAGC 8234742
Query 8338 AATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTA 8397
|| ||||| | ||||| || ||||| | | || ||||| | || || ||||| |
Sbjct 8234741 AACTTGTGCACAGAAATCGTGGAGTACTCCTCTCCGGACGAGATTGCAGTCTGCAACTTG 8234682
Query 8398 GCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTCAAACACTTACGACTTTGAACAA 8457
|| || | | ||| |||||| | | | || || ||||| ||| || ||
Sbjct 8234681 GCATCCATCGCCCTCAACATGTTCGTCACT---CCCGAGAAGACATACGA-TTTCAAGAA 8234626
Query 8458 --TTGAAAAACGCCGT--GCAAGTGACGG-TAC--GCAATTTAGATCGCATCATTGATGT 8510
|| || | || ||| ||||| ||| ||| | | ||||| ||| |
Sbjct 8234625 ACTT----AAGGAAGTTACCAA--GACGGTTACCAAGAATCTTAACAAGATCATCGATAT 8234572
Query 8511 CAATTTTTATCCCTTGGAAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGT 8570
|| || || ||| || ||| || ||| ||| || | || | ||||| ||| |
Sbjct 8234571 AAACTTCTACCCCCTGCCAGAGGCAAAGAAATCCAACTTGAGGCATCGTCCCGTGGGCAT 8234512
Query 8571 GGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGA 8630
|| || || || | || ||||| | | |||| ||||||| ||||| ||||
Sbjct 8234511 CGGTGTCCAGGGATTCGCTGACGCCCTAATTCTTATGCGTTTCCCCTATGAAAGTGAAGA 8234452
Query 8631 AGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAG 8690
||| | | | || | ||| ||||| | || |||||||| | ||||||||
Sbjct 8234451 AGCCGGTCTCTTGAATCAGCAGATATTCGAAACCATCTACTACGGCGCCCTGGAAGCCAG 8234392
Query 8691 CTGTCAACTTGCCCGAGAATTG--GGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGC 8748
||| |||| |||| || || | ||| | || ||| | || | ||| || || | |||
Sbjct 8234391 TTGTGAACTGGCCC-AG-ATCGACGGCCCATATGAAACCTATGAGGGAAGTCCCGTGAGC 8234334
Query 8749 CGCGGAATATTGCAATACGACATGTGG---AATGTCACGCCCACCTCTTTGTGGAATTGG 8805
|| || |||| |||||||||||| || || || | | | ||||| ||| | |
Sbjct 8234333 AAAGGCATTCTGCAGTACGACATGTGGGACAAAGTGCCGACAAAC-CTTTG-GGACTGGC 8234276
Query 8806 AGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTAC 8865
|| | |||| || || |||| | || || || |||||||| ||
Sbjct 8234275 AG-AAACTGAAGGAGTCCATCAAGCAGCACGGTGTCCGGAACTCCCTGTTGGTTGCGCCT 8234217
Query 8866 ATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACC 8925
|||||||| || | ||||| ||||| ||||| ||||||||||| || ||||||| |||
Sbjct 8234216 ATGCCCACTGCGTCCACTGCCCAAATTATGGGCAACAACGAATCTTTCGAGCCGTACACA 8234157
Query 8926 AACAACGTGTACGTGAGACGAGTGTTGGCCGGCGATTTTTTAATGCTGAATCGTCATTTG 8985
| || | || || ||||| || | ||||| || | || | || | |||||||
Sbjct 8234156 ACGAATATTTATACCAGGCGAGTTCTGTCTGGCGAATTCCAAGTGGTTAACCATCATTTG 8234097
Query 8986 ATGCGCGACTTGATCGAAGCGGGCGTT----TACGACGACAAAATGCGCGATGCCATCGT 9041
| | ||| | | || ||| || || ||||||||| | | | | ||| |
Sbjct 8234096 TTAAGGGACCT-AACGGAGCTGGACTTGTGGGACGACGACATGAAGAACCAAATCAT--T 8234040
Query 9042 GGAAGCCAACGGCAGCGTTCAGAACATTGACGCGGTGCCTCAACACATTAAAGAGCTGTA 9101
|| || ||| | ||||| ||||| || | || || | | || |||||
Sbjct 8234039 TCCAG-CAGGGGCTCAATCCAGAATATTGAGGCCATCCCCCAGAAGGTCCGCGATCTGTA 8233981
Query 9102 TAAAACCGTTTGGGAAAT-GAAGCAAAGCACGCTGATCGGCATGGCTGCGGATAGAGGCG 9160
||||| || |||||||| || ||| || || ||||| || ||| |||| |
Sbjct 8233980 CAAAACAGTGTGGGAAATCTCAGTGAAG-TCGACCATTAAGATGGCCGCAGATCGAGGAG 8233922
Query 9161 CTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAACTTACG---CTT 9217
| || || ||||||||||| || || ||| | || || | |||| || |
Sbjct 8233921 CGTTCATAGATCAGAGTCAGTCGTTCAACATTCATGTGGCAGAGCCAAACTATGGAAAAC 8233862
Query 9218 TGATGTCCA-GCA-TTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGCATGTACTA 9275
| | ||||| || ||| |||| | |||||| ||| | ||||| || ||||||||
Sbjct 8233861 TCACGTCCATACACTTC--TATT---CCTGGAAAGCTGGTCTCAAAACTGGAATGTACTA 8233807
Query 9276 TTTGCGCACAAAACCCGCCGC 9296
|||||||||| || || ||
Sbjct 8233806 CCTGCGCACAAAGCCAGCTGC 8233786
Score = 120 bits (132), Expect = 3e-22
Identities = 162/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| | ||| | ||||| ||||| |||||||| ||||| | |||| |
Sbjct 8331068 AGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGG 8331009
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| ||||| || || |||| |||||||||||| || || || ||||||
Sbjct 8331008 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCT 8330949
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || |||||| || | || || || | ||| || || || ||
Sbjct 8330948 TTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAGCGTG 8330889
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTT 134721
||||| || || || | || |||||||| || ||||| |||| ||
Sbjct 8330888 ATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATCTTGTGTT 8330843
>seq5238
Length=3592495
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| ||||| || || || ||||| || |||||||||||| | |||| |
Sbjct 2679451 AGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGG 2679392
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || ||||| ||||| || || |||| |||||||||||| || || ||||| ||
Sbjct 2679391 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATGCCCTCC 2679332
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || || | ||||| || | ||||| || | ||
Sbjct 2679331 TTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTG 2679272
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| | ||||| ||||| ||||||||
Sbjct 2679271 ATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2679234
>seq5402
Length=10656099
Score = 105 bits (116), Expect = 7e-18
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| || |||||||||||| | ||| | ||| || || ||
Sbjct 571662 GTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTCCTCCAGTTG 571721
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || |||| |||||||||||| || || ||||| || || || || || ||
Sbjct 571722 CTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCCTGGATCTT 571781
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || || | |||||||| | ||||| || | |||||||| ||||| ||
Sbjct 571782 GGCCTTCACATTCTCAATCGTGTCGGAGGGCTCCACCTCCAAGGTAATGGTCTTACCAGT 571841
Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || || |||||||||
Sbjct 571842 CAAGGTCTTCACAAAGATCTGCATTTTG 571869
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576
|| || ||||| || |||||||| || || ||| | ||| |||||||| |||||
Sbjct 571441 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCCTCGAGCTGCTTGCCG 571500
Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636
|| || |||| |||||||||||| || || || || || || || || || || ||
Sbjct 571501 GCGAAGATCAGACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTC 571560
Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696
|| || | ||||| || | ||||| || || || ||||| || ||||| |||||
Sbjct 571561 ACGTTCTCGATGGTGTCAGATGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAAAGTC 571620
Query 134697 TTAACGAAAATTTGCAT 134713
|| || || || |||||
Sbjct 571621 TTGACAAAGATCTGCAT 571637
>seq5395
Length=2659632
Score = 102 bits (112), Expect = 8e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| || ||||| ||||| || |||||||| |||
Sbjct 975759 CCACCACGGAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 975818
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| || || || || |||| ||||||||| || || ||
Sbjct 975819 AGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 975878
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || || || || | |||||||| | || ||
Sbjct 975879 ATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCGGAGGGCTCGACC 975938
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || ||||| || || || | || || |||||||||||||| |||
Sbjct 975939 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAAATTTGCATGTTG 975989
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| || ||||| ||||| || |||||||||||| | |||| |
Sbjct 975540 AGACGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGT 975599
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || ||||| || || || || |||| ||||||||| || || || || || ||
Sbjct 975600 CCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATTCCCTCC 975659
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || || | || ||||| | || || || || ||
Sbjct 975660 TTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGGCTCGACCTCAAGGGTG 975719
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || | || || ||||| || |||||
Sbjct 975720 ATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 975757
>seq5267
Length=4296760
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 21532 TCCACGCACAAACGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATG 21591
||||| || |||||||||||||||||| ||||| || ||||| |||||||||||||
Sbjct 668566 TCCACCAGCAGACGATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATG 668625
Query 21592 CCCAACAGATCGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTC 21650
|| | || | || || | || ||||||| ||||||| ||| || ||||| || ||
Sbjct 668626 CCGATGAGGTTTACGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATC 668684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505363508557960
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