Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq5396 363 2e-95
seq5267 102 1e-16
>seq5396
Length=9561034
Score = 363 bits (402), Expect = 2e-95
Identities = 1229/1891 (65%), Gaps = 50/1891 (3%)
Strand=Plus/Plus
Query 68364 CTTATCCAATGTAAACTGAATGG-GTGAGGATGCGGGTTTTGTACGTAGATAGTACATAC 68422
|||||||| || |||||||||| || | | || || ||||| || || |||||||| |
Sbjct 8233758 CTTATCCACGGTGAACTGAATGGCGTTTGCA-GCTGGCTTTGTGCGCAGGTAGTACATTC 8233816
Query 68423 CGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTG 68482
| ||||| ||||| |||| ||||| || || || ||||| ||| |||
Sbjct 8233817 CAGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTTG 8233876
Query 68483 GATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCG 68542
| || || | |||||| || | ||| ||||| ||||| ||||| ||||||| |||||| |
Sbjct 8233877 GCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCGG 8233936
Query 68543 CCATTTTTATAATACTCTTT--TGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGAT 68600
|||| || || | ||| |||| |||||||| | || || | | | ||
Sbjct 8233937 CCATCTTAATGGTCGACTTCACTGAG--ATTTCCCACACTGTTTTGTACAGATCGCGGAC 8233994
Query 68601 ATCATCTGG---AAGGC-TCG-TATTTTGAATGGATCCACCATCGGATATAATTATATTC 68655
| ||||| | ||| || |||| || || || || | ||| || ||| |||
Sbjct 8233995 CT--TCTGGGGGATGGCCTCAATATTCTGGATTGAGCCCCTGCTGGAAATGATTTGGTTC 8234052
Query 68656 TTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACT 68715
|| || || || | |||||| | |||||||| | || | | ||| | |||||
Sbjct 8234053 TTCATGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAACC 8234112
Query 68716 ATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACA 68775
| ||| ||||| ||||| | |||| | || |||||||| | || || || || | |
Sbjct 8234113 ACTTGGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAAA 8234172
Query 68776 GATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAA 68835
||||| || || |||| |||||| ||||| || ||||| |||||||| || ||||| |
Sbjct 8234173 GATTCGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAGG 8234232
Query 68836 CTATTTCTAAGACCATG-TGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATC 68894
|| | | ||| || || | |||| || || || | | ||| |||||||| |
Sbjct 8234233 GAGTTCCGGACACCGTGCTGCT-TGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGTT 8234291
Query 68895 AGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA--TCCA 68952
| || || | ||| | ||||| || ||||| || || || || || |||
Sbjct 8234292 TGTCGGCACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCT--CACGGGACTTCCC 8234349
Query 68953 TTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCG 69012
| ||| |||||||| || || || | || ||||||||||| || || | || |||
Sbjct 8234350 TCATAGGTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCCG 8234409
Query 69013 TAATAAATTGTTTCGAAAATCTTCTTATT---GAGATCTTGTGCTTCTAGACTATCGAAT 69069
|| || || |||||||| |||| || ||| |||| | |||||| ||| || |
Sbjct 8234410 TAGTAGATGGTTTCGAATATCTGCTGATTCAAGAGACC---GGCTTCTTCACTTTCATAG 8234466
Query 69070 GGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTA 69129
|| || | | |||||| | || || || |||||||| || || || || | || | |
Sbjct 8234467 GGGAAACGCATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGA 8234526
Query 69130 TGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 69189
|| ||| || || | | || ||||| | || || | || ||||| || || ||
Sbjct 8234527 TGCCTCAAGTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTG 8234586
Query 69190 TTAAGATT-TCGGACTACTACTT--TAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT 69246
|||||||| | || | ||| || || ||||| ||||| ||||| || ||
Sbjct 8234587 TTAAGATTCTTGGTAACCGTCTTGGTA---ACTTCCTTAAGTTTCTTGAAATCGTAT-GT 8234642
Query 69247 CCATCT-----ATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCT 69301
| ||| | || ||||| || || || | ||||| | || || ||||| | ||
Sbjct 8234643 -CTTCTCGGGAGTGACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCT 8234701
Query 69302 CATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCA 69361
| | | | | || | | || ||||| || | || || || ||||| || || |
Sbjct 8234702 CGTCCGGAGAGGAGTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGA 8234761
Query 69362 GATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAG 69421
||| ||||| || ||||| |||| ||||| ||||| | || || | || | ||||
Sbjct 8234762 CATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAG 8234821
Query 69422 TTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTA--TTACGGTCTT 69479
|||| | ||| | || ||||| | ||| | | ||| || | | ||| ||
Sbjct 8234822 TTTCGACCTGTGCCTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGG--TT 8234879
Query 69480 GTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATC 69539
| ||| ||||| ||||| | ||| | | |||||||||||| ||||| |||||
Sbjct 8234880 GGCACGACCCTCTTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATC 8234939
Query 69540 ATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCG 69599
| | ||||| |||| || |||||||| | |||||| | ||| ||| || ||
Sbjct 8234940 GTGAAGGCCAGGGCATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCG 8234999
Query 69600 TTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659
|||||||| |||||||| ||||| || || || ||||| | || | ||| || ||
Sbjct 8235000 CTTCATAAAGAGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTC 8235059
Query 69660 ATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 69719
|| || || || || ||||| || || ||||| | | || || ||||| || || ||
Sbjct 8235060 CTTGCCGGTGTTCTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAG 8235119
Query 69720 ATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTT 69779
|| || || | | | || || || || ||||||||||| | || | || ||
Sbjct 8235120 GTAAATGGCAAAGGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATT 8235179
Query 69780 ATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839
|| |||| |||| ||| |||| | ||||| || | || || || || |||| |
Sbjct 8235180 GTTGAAGACCCTCAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGA 8235239
Query 69840 ACTTCCTCTTGCGCGAATATTACTAATAGA----TAGACCTATTCCTCCTGCCATTTTAG 69895
| || |||| || || ||| || || || || || || ||| || |
Sbjct 8235240 GGTGCCCTTTGCTCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCG 8235295
Query 69896 AGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGT 69955
|||| | || || | | || | | | | || ||||| ||| || || |||||
Sbjct 8235296 AGATCATGGCGCACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGG 8235355
Query 69956 TAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAG 70015
| | || ||||| |||| || | | | || | || ||| | || || |
Sbjct 8235356 TCAAGAGGAAACAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCG 8235415
Query 70016 ATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATAT 70075
| || |||||||| || || || | || || || ||||| | |||| |||||||
Sbjct 8235416 ACGCATGAGTGAAGTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTATAT 8235475
Query 70076 CCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTT 70135
|| ||| ||||| ||||| || |||||||||||||| || || || || | |||
Sbjct 8235476 CCTCTCCATGGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCAGCGATTT 8235535
Query 70136 TATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATG 70195
| ||| | |||| ||| || || ||| || || || |||||||||||||| ||
Sbjct 8235536 TTCCGTTTCTCTTCAGCAGATAGGAACGTTCGAGGGTCTTGAACCCAAAATAGTTATACC 8235595
Query 70196 AAAAGTCTCTTTCGTAAATAATAACAGAATT 70226
|||||| | ||||| || ||| ||| ||
Sbjct 8235596 CAAAGTCGCGGTCGTAGATTATAGAAGAGTT 8235626
>seq5267
Length=4296760
Score = 102 bits (112), Expect = 1e-16
Identities = 294/448 (66%), Gaps = 6/448 (1%)
Strand=Plus/Plus
Query 39317 ACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAAT 39376
|||||||| ||||| || || || |||||||| || || || ||||| ||||
Sbjct 668446 ACTCCCATGCGCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGC 668505
Query 39377 GATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAAT 39436
|| || | |||||||| | || || || | | ||| || | || || || |
Sbjct 668506 GAGATCATCTCCATGAAGTTGAAGGGGTTCTTGGTATTGTAGATCTTGCCAACGCCCAGC 668565
Query 39437 TCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATT 39496
|| | || | ||| || || ||||| ||||| ||| | || ||||||||
Sbjct 668566 TCCACCAGCAGACGATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATG 668625
Query 39497 CCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCT 39556
|| ||||| || || || | || || || || ||||| | || ||| | || || ||
Sbjct 668626 CCGATGAGGTTTACGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCG 668685
Query 39557 GTTATTATC--GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTA 39614
|| ||| |||| | | ||| || ||| | |||| || || | ||||| |
Sbjct 668686 CGGATGATCTCGATGATGCG--CTCGCGCCTGGGTCGCTGCACCAAGTGCTGGAACATCA 668743
Query 39615 AGCA-GGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673
||| ||| ||||| || || |||||||| || | || | ||||| || || ||
Sbjct 668744 -GCACGGCAAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTC 668802
Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733
||||| ||||| ||||| ||||| || ||||| || |||| || || || |||
Sbjct 668803 AGTCCCGGCATCAGACCGCGCTTCTTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAAG 668862
Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAA 39761
|||||||| || || || ||||| ||||
Sbjct 668863 AAGATGCCCTCGACGGCGGCAAAGGCAA 668890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686861377533720
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