Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq5267 84.2 2e-11
>seq5267
Length=4296760
Score = 84.2 bits (92), Expect = 2e-11
Identities = 229/350 (65%), Gaps = 3/350 (1%)
Strand=Plus/Minus
Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990
|| || || || || ||||| || || || ||||| || || | || ||||| ||||||
Sbjct 669098 GAGGCTCGCTGCTTCTATGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGTAC 669039
Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCG 44050
||| | ||||| || || |||||| ||| |||| || | |||| || ||
Sbjct 669038 AGTGTGCTGATCGACACCTACATCCGGGATCCGCACCAGCGCGAATACCTGTTCAACGCC 668979
Query 44051 ATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCA 44110
|| || ||| | || || | || | || || |||||||||||| ||||| ||
Sbjct 668978 ATCGAGACAATGCCCGCTGTGAAGCGCAAGGCGGACTGGGCCCTTTCCTGGATCTCCTCC 668919
Query 44111 AATGATTC---TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTT 44167
|| | | || || || || | | || ||||| | || || ||||| |||||
Sbjct 668918 AAGGCGGCCAACTTCGGGGAGCGCATCATTGCCTTTGCCGCCGTCGAGGGCATCTTCTTC 668859
Query 44168 TCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACG 44227
|| || || |||| || ||| | ||||| || ||| ||||||| || ||||
Sbjct 668858 AGCGGCAGCTTCGCCTCCATTTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGACTGACC 668799
Query 44228 TTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGC 44277
|| || || ||| | || || || || ||| | || ||||| |||||
Sbjct 668798 TTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCACTGCGACTTTGC 668749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397429246615615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |