Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5267 102 3e-16 seq5396 86.0 2e-11 >seq5267 Length=4296760 Score = 102 bits (112), Expect = 3e-16 Identities = 349/536 (65%), Gaps = 30/536 (6%) Strand=Plus/Minus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| |||||||| | ||||||||||||||| || |||| ||| || || || Sbjct 669266 TTCTGGACCGTGGAGGAGGTGGATCTCTCCAAGGACCTGACCGACTGGCAC---CGCCTG 669210 Query 443397 TCTAGCCATGAACGCGATTTCTTCAAATGCATCTTGGCCTTCTTTGCACCGAGCGACGGT 443456 | | || ||| | ||| || | | |||||||||| || | ||| || Sbjct 669209 AAGGACGACGAGCGCCACTTCATCTCGCACGTGCTGGCCTTCTTCGCCGCCTCCGATGGC 669150 Query 443457 ATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGC 443516 ||||| ||||| ||||| ||| ||| | | ||| | ||| ||||| ||| Sbjct 669149 ATCGTTAACGAGAACCTGGTCGAGCGCTTCAGCCAGGAGGTGCAGATCACGGAGGCTCGC 669090 Query 443517 TACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTG 443576 | |||||| | ||||| ||| ||||||||| | ||| | ||| | |||||| | || Sbjct 669089 TGCTTCTATGGCTTCCAGATCGCCATGGAGAACGTGCACTCGGAGATGTACAGTGTGCTG 669030 Query 443577 ATCAAGACACTAATTCCGAACGAAGACGAAC-AGCG-GTCCATCTTCTCATCGT--TCAT 443632 ||| | || ||| |||| | | || || |||| | | || ||| || || Sbjct 669029 ATCGACAC-CTACATCCG---GGATCCGCACCAGCGCGAATACCTGTTCAACGCCATCGA 668974 Query 443633 GACCACGCCAGGCATCACTGAA----AAGACTCGCTGGGCAAAACAGTGG-----CTCGA 443683 ||| | ||| | | |||| ||| | |||||| ||| ||| | Sbjct 668973 GACAATGCCCG----CTGTGAAGCGCAAGGCGGACTGGGCCCTTTCCTGGATCTCCTCCA 668918 Query 443684 ACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTT 443743 | | | || ||||| ||||| | | || ||||| | ||||| || | || Sbjct 668917 AGGCGGC-----CAACTTCGGGGAGCGCATCATTGCCTTTGCCGCCGTCGAGGGCATCTT 668863 Query 443744 GTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTC 443803 || ||||||||| || |||||||| |||||| |||| ||||| || || |||| || | Sbjct 668862 CTTCAGCGGCAGC-TTCGCCTCCATTTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGAC 668804 Query 443804 TGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCC 443859 ||||||| ||||| || ||| || |||||||| |||| |||||||| ||| Sbjct 668803 TGACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCACTGCGACTTTGCC 668748 >seq5396 Length=9561034 Score = 86.0 bits (94), Expect = 2e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 254993 GTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTC 255052 || |||||||| ||||| ||||| |||||||| || |||||||| || || || || || Sbjct 8235188 GTCTTCAACAATGTGGCGCGCTATGTCGATCAGGGAGGCGGCAAGCGTCCCGGTGCCTTT 8235129 Query 255053 ACCATCTACCTGGAGCCGTGGCACGCCGAC 255082 |||| ||||||||||| |||||| | ||| Sbjct 8235128 GCCATTTACCTGGAGCCCTGGCACTCGGAC 8235099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588223603884735