Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5267 174 2e-38
seq5396 154 2e-32
>seq5267
Length=4296760
Score = 174 bits (192), Expect = 2e-38
Identities = 307/443 (69%), Gaps = 6/443 (1%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || || ||| ||||||||||||||| ||||| ||||||| ||| |||||||
Sbjct 668461 TACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCATG 668520
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGC--ACTCCAATCTGTTTGAGGAGAC 129845
|| | || |||||||| | || | || || || || || | || || ||||
Sbjct 668521 AAGTTGAAGGGGTTCTTGGTATTGTAGAT--CTTGCCAACGCCCAGCTCCACCAGCAGAC 668578
Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905
|||||| ||| | || ||||||| ||||| ||| | ||||| |||||||||||
Sbjct 668579 GATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATGCCGATGAGGTTTA 668638
Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
|| | || || || |||| ||| ||| ||| ||||||| || || | ||| ||
Sbjct 668639 CGGGCAAGGCATCGGTGAGGAACTCCTGCTCTATGGCCACAGCATCGCGGATGATCTCGA 668698
Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCC 130024
||| ||| | ||| || ||| | |||| || ||| | ||||||||| ||
Sbjct 668699 TGATGCGCTC-GCGCCTGGGTCGCTGCACCAAGTGCTGGAACATCAGCACGGCAAAGTCG 668757
Query 130025 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 130084
||| || |||||||| ||||||||||| || || |||||| ||| || ||||| |||
Sbjct 668758 CAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGTCCCGGCATCAGA 668817
Query 130085 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144
|| |||||||||| ||||||||| | || ||| ||||||||| ||||| ||
Sbjct 668818 CCGCGCTTCTTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAAGAAGATGCCCTCGACG 668877
Query 130145 CACGCGAACGCAAAGAGACGCTC 130167
|| || |||| || |||||
Sbjct 668878 GCGGCAAAGGCAATGATGCGCTC 668900
>seq5396
Length=9561034
Score = 154 bits (170), Expect = 2e-32
Identities = 589/911 (65%), Gaps = 19/911 (2%)
Strand=Plus/Plus
Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240
||| ||||| || ||||| ||||| || | || ||||| |||| |||||||| |||||
Sbjct 8234145 ATAAATATTCGTTGTGTACGGCTCGAAAGATTCGTTGTTGCCCATAATTTGGGCAGTGGA 8234204
Query 118241 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 118300
|| |||||||| || || | | ||| ||| |||| ||| | | | | ||| ||
Sbjct 8234205 CGCAGTGGGCATAGGCGCAACCAACAGGGAGTTCCGGACACCGTGCTGCTTGATGGACTC 8234264
Query 118301 CTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG---CCACATATCAAACTG 118357
||| || | |||||| | || |||||| | | | |||||| || ||||
Sbjct 8234265 CTTCAGTTTCTGCCAGTCCCAA---AGGTTTGTCGGCACTTTGTCCCACATGTCGTACTG 8234321
Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417
|| || |||| | | | || ||||||| | || ||||||||||| || | || ||
Sbjct 8234322 CAGAATGCCTTTGCTCACGGGACTTCCCTCATAGGTTTCATATGGGCCGTCGATCTGGGC 8234381
Query 118418 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477
|| ||| | || || || ||||| ||| || || ||||| || || | |||||
Sbjct 8234382 CAGTTCACAACTGGCTTCCAGGGCGCCGTAGTAGATGGTTTCGAATATCTGCTGATTCAA 8234441
Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGAC 118536
||| || || ||| | | || | ||| || ||| | | || |||| |
Sbjct 8234442 GAGACCGGCTTCTTCACTTTCATAGGGGAAAC-GCATAAGAATTAGGGCGTCAGCGAATC 8234500
Query 118537 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCACG 118595
| |||||||||| ||| | || ||||| |||| || || ||| || ||| || |
Sbjct 8234501 CCTGGACACCGATGCCCACGGGACGATGCCTCAAGTTGGATTTCTTTGC-CTCTGGCAGG 8234559
Query 118596 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 118655
|| || || || ||||||| | | | || ||||| ||||| || ||| || | |||
Sbjct 8234560 GGGTAGAAGTTTATATCGATGATCTTGTTAAGATTCTTGGTAACCGTCTTGGTAACTTCC 8234619
Query 118656 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 118715
| ||| || | | |||| | || |||| | |||| || | ||||||||
Sbjct 8234620 TTAAGTTTCTTGAAATCGTA--TG-TCTTCTCGGGAGTGACGAACATGTTGAGGGCGATG 8234676
Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775
|| |||| || || || | |||| ||| | | |||||| | ||||| ||||||
Sbjct 8234677 GATGCCAAGTTGCAGACTGCAATCTCGTCCGGAGAGGAGTACTCCACGATTTCTGTGCAC 8234736
Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835
||||| | ||| |||||||| | |||| || || ||| |||| || ||||||
Sbjct 8234737 AAGTTGCTGCACTTGATGGTGCCGACATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCC 8234796
Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-- 118893
|| | |||||||| || | || || || || | || | ||| || ||| |
Sbjct 8234797 TTAAACAGCATGTAGGGGTTTCCAGTTTCGACCTGTGCCTCAATAATGGCGAACCACAAG 8234856
Query 118894 CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGG 118953
|| | ||| || || |||||| || ||||||| ||| ||||| || |
Sbjct 8234857 GATTG--AGCCTTAACCGTTCGGTTGGCACGACCCTCTTGCTCATACTTCTCATACAACT 8234914
Query 118954 CTTCAAACTCTTCACCCACGGCCTC-TGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGA 119012
||| || || || ||| | || ||| || || || |||| || || | ||
Sbjct 8234915 TTTCGAATTCATCGCCCCACACATCGTGA-AGGCCAGGGCATTTATGCGGACACATTAGT 8234973
Query 119013 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAG 119072
||||| | ||| |||| || |||||||| ||||| || || ||||| || || ||
Sbjct 8234974 GACCAATCTCCATTGGCCTCGACGCGCTTCATAAAGAGATCGGGTATCCACAGGGCGTAG 8235033
Query 119073 AAGAGATCCCG 119083
|| ||||| ||
Sbjct 8235034 AACAGATCGCG 8235044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618392504779880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |